RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 HLA-HP01893 362 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CCL20P78556 96 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 OR10AD1Q8NGE0 317 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 RDH5Q92781 318 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 HAS2Q92819 552 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CHST5Q9GZS9 411 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 C19orf12Q9NSK7 152 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CACNA1GO43497 2377 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 GVINP1Q7Z2Y8 2422 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 IGKV1-12A0A0C4DH73 117 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 IGKV1D-12P01611 117 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 FCGR3AP08637 254 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 HLA-GP17693 338 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 PTAFRP25105 342 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CFPP27918 469 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 GNMTQ14749 295 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 C3AR1Q16581 482 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 PNLIPRP3Q17RR3 467 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 ZNF674Q2M3X9 581 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 SPATA46Q5T0L3 261 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 AAED1Q7RTV5 226 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 ZNF695Q8IW36 515 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 TP53RKQ96S44 253 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 NECAP2Q9NVZ3 263 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 ZNF107Q9UII5 783 aaPredicted RBP7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 KIAA2026Q5HYC2 2103 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 ZFHX4Q86UP3 3567 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CACNA1DQ01668 2161 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 FIGNL2A6NMB9 653 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 COLCA2A8K830 154 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 SERPINE3A8MV23 424 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 JTBO76095 146 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 RBP2P50120 134 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 SULT1A2P50226 295 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 ZNF92Q03936 586 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CXorf66Q5JRM2 361 aaPredicted RBP7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 LHFPL1Q86WI0 220 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CALHM1Q8IU99 346 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 SUMF2Q8NBJ7 301 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 OR5T1Q8NG75 326 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 NAA60Q9H7X0 242 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 LUZP4Q9P127 313 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 C19orf25Q9UFG5 118 aaPredicted RBP7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 LIPGQ9Y5X9 500 aa7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 CHCHD2Q9Y6H1 151 aaPredicted RBP7.79□□□□□ -1.16
HDGFL3-206ENST00000568294 TMEM131Q92545 1883 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 NSG1A0A0A6YYJ2 146 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 A0A1W2PNV4 684 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 PRSS44E7EML9 344 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 H0YL77 283 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 ADAM20O43506 726 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 KLK3P07288 261 aaPredicted RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 RFPL3SP0C7P2 107 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 NTF4P34130 210 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 THBS4P35443 961 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 HOXA1P49639 335 aaPredicted RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 GPM6AP51674 278 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 DVL1P1P54792 670 aaPredicted RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 NDUFA6P56556 154 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 OR2B11Q5JQS5 317 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 C9orf152Q5JTZ5 239 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 IFT22Q9H7X7 185 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 CALHM2Q9HA72 323 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 TMEM100Q9NV29 134 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 CARHSP1Q9Y2V2 147 aaKnown RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 FREM1Q5H8C1 2179 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 LRP4O75096 1905 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 ZFP92A6NM28 416 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 ZNF587BE7ETH6 402 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 IAPPP10997 89 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 BMP5P22003 454 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 TUBG1P23258 451 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 HAAOP46952 286 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 GSK3AP49840 483 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 FGF8P55075 233 aaPredicted RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 SRSF4Q08170 494 aaKnown RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 TMEM267Q0VDI3 215 aaPredicted RBP7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 MALLQ13021 153 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 SOHLH1Q5JUK2 328 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 SGCZQ96LD1 299 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 CACFD1Q9UGQ2 172 aa7.78□□□□□ -1.16
HDGFL3-206ENST00000568294 CRYM-AS1A6NIL9 109 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 H7C1Q1 480 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 TERTO14746 1132 aaKnown RBP7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 IGLV3-19P01714 112 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 APOC1P02654 83 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 GDF1P27539 372 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 SULT1A1P50225 295 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 SUMO3P55854 103 aaPredicted RBP7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 CARD18P57730 90 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 NAAAQ02083 359 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 ZNF154Q13106 437 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 C21orf62-AS1Q17RA5 79 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 OPN5Q6U736 354 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 RABEPKQ7Z6M1 372 aa7.77□□□□□ -1.16
HDGFL3-206ENST00000568294 RPS19BP1Q86WX3 136 aaKnown RBP7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms