RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TMEM138Q9NPI0 162 aa10.73□□□□□ -0.69
CNOT1-213ENST00000568158 ZNF69Q9UC07 566 aa10.73□□□□□ -0.69
CNOT1-213ENST00000568158 ING4Q9UNL4 249 aa10.73□□□□□ -0.69
CNOT1-213ENST00000568158 CUBNO60494 3623 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 MAGEA13PA6NCF6 341 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 TOX4O94842 621 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 KDM4BO94953 1096 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 TK1P04183 234 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 MMP9P14780 707 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 BDKRB2P30411 391 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 GP2P55259 537 aaKnown RBP10.72□□□□□ -0.69
CNOT1-213ENST00000568158 C11orf91Q3C1V1 193 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 ACSM3Q53FZ2 586 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 LIPKQ5VXJ0 399 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 Q8IYB0 196 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 SAXO1Q8IYX7 474 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 TEX29Q8N6K0 151 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 ZSCAN4Q8NAM6 433 aaPredicted RBP10.72□□□□□ -0.69
CNOT1-213ENST00000568158 OR4M1Q8NGD0 313 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 OR10K1Q8NGX5 313 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 DERL3Q96Q80 235 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 TBX15Q96SF7 602 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 NUP50Q9UKX7 468 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 GSTK1Q9Y2Q3 226 aa10.72□□□□□ -0.69
CNOT1-213ENST00000568158 TMEM82A0PJX8 343 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 K7N7A8 449 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 CDRT1O95170 752 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 HAND1O96004 215 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 MAS1P04201 325 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 ZNF93P35789 620 aaPredicted RBP10.71□□□□□ -0.69
CNOT1-213ENST00000568158 PTGFRP43088 359 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 OR3A4PP47883 348 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 DLX1P56177 255 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 PPP3R1P63098 170 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 PRB3Q04118 309 aaPredicted RBP10.71□□□□□ -0.69
CNOT1-213ENST00000568158 SCN1BQ07699 218 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 GPR50Q13585 617 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 TPBGQ13641 420 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 ZNF146Q15072 292 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 KRTAP21-3Q3LHN1 58 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 DDI2Q5TDH0 399 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 MS4A15Q8N5U1 240 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 Q8N7P7 452 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 ASCC1Q8N9N2 400 aaKnown RBP10.71□□□□□ -0.69
CNOT1-213ENST00000568158 C8orf46Q8TAG6 207 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 TNFAIP8L1Q8WVP5 186 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 TMEM203Q969S6 136 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 SNX22Q96L94 193 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 NR1H4Q96RI1 486 aaPredicted RBP10.71□□□□□ -0.69
CNOT1-213ENST00000568158 MGLLQ99685 303 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 SEBOXQ9HB31 216 aaPredicted RBP10.71□□□□□ -0.69
CNOT1-213ENST00000568158 ISYNA1Q9NPH2 558 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 C19orf12Q9NSK7 152 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 ONECUT1Q9UBC0 465 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 BLOC1S6Q9UL45 172 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 FOXJ3Q9UPW0 622 aa10.71□□□□□ -0.69
CNOT1-213ENST00000568158 TRAV40A0A0B4J280 105 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 A0A1W2PQ09 198 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 MEX3AA1L020 520 aaKnown RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 SH2D1BO14796 132 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 RRP9O43818 475 aaKnown RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 ZNF737O75373 536 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 HTR3BO95264 441 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 ERVFRD-1P60508 538 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 EMX1Q04741 257 aaPredicted RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 TMEM200BQ69YZ2 307 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 Q6P435 159 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 ASCL4Q6XD76 172 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 C17orf107Q6ZR85 190 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 CEACAM19Q7Z692 300 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 PDZD9Q8IXQ8 264 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 FAM185AQ8N0U4 392 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 PXT1Q8NFP0 134 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 OR4S1Q8NGB4 309 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 UFD1Q92890 307 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 LHX4Q969G2 390 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 MDFIQ99750 246 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 SLC6A7Q99884 636 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 YTHDF1Q9BYJ9 559 aaKnown RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 FAM192AQ9GZU8 254 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 MS4A7Q9GZW8 240 aaPredicted RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 CHST6Q9GZX3 395 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 PPIL3Q9H2H8 161 aaKnown RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 ACOT13Q9NPJ3 140 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 SF3B6Q9Y3B4 125 aaKnown RBP10.7□□□□□ -0.7
CNOT1-213ENST00000568158 LRRC42Q9Y546 428 aa10.7□□□□□ -0.7
CNOT1-213ENST00000568158 SIRPB1O00241 398 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 TCF21O43680 179 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 PSPNO60542 156 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 VENTXO95231 258 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 OR2H2O95918 312 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 CPEP16870 476 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 FSTP19883 344 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 GABRR1P24046 479 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 FPR2P25090 351 aa10.69□□□□□ -0.7
CNOT1-213ENST00000568158 RPS25P62851 125 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms