RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CYB5AP00167 134 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 IL1AP01583 271 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 IGKV1D-12P01611 117 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 EGR1P18146 543 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 BCL3P20749 454 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 MPZP25189 248 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 HTR2CP28335 458 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 PSMD7P51665 324 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 CLDN12P56749 244 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 IL24Q13007 206 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 RAB11BQ15907 218 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 HFEQ30201 348 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 DEFB113Q30KQ7 82 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 C1orf100Q5SVJ3 147 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 IDNKQ5T6J7 187 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 SFRP4Q6FHJ7 346 aaPredicted RBP6.49□□□□□ -1.37
SMG1-214ENST00000568038 GLIPR1L1Q6UWM5 242 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 WDR82Q6UXN9 313 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 LYPD6Q86Y78 171 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 CDH26Q8IXH8 852 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 C19orf18Q8NEA5 215 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 OR10K1Q8NGX5 313 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 IL17DQ8TAD2 202 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 ERGIC1Q969X5 290 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 DGCR14Q96DF8 476 aaKnown RBP6.49□□□□□ -1.37
SMG1-214ENST00000568038 SEH1LQ96EE3 360 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 S100A13Q99584 98 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 UQCC2Q9BRT2 126 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 METTL9Q9H1A3 318 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 KCNK15Q9H427 330 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 TMEM106BQ9NUM4 274 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 BEX4Q9NWD9 120 aaPredicted RBP6.49□□□□□ -1.37
SMG1-214ENST00000568038 MTCH1Q9NZJ7 389 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 DAPK2Q9UIK4 370 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 POLDIP2Q9Y2S7 368 aa6.49□□□□□ -1.37
SMG1-214ENST00000568038 HELZ2Q9BYK8 2649 aaKnown RBP6.49□□□□□ -1.37
SMG1-214ENST00000568038 USP9YO00507 2555 aaPredicted RBP6.49□□□□□ -1.37
SMG1-214ENST00000568038 FLNCQ14315 2725 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 IGHV3OR15-7A0A075B7D8 119 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 LRRC30A6NM36 301 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 F8VVB4 439 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 F8VWA3 439 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 TRAPPC2LH3BP13 241 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 TMEM178BH3BS89 294 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 AIPO00170 330 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 PPIHO43447 177 aaKnown RBP6.48□□□□□ -1.37
SMG1-214ENST00000568038 RP2O75695 350 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 NXPH2O95156 264 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 CSTBP04080 98 aaKnown RBP6.48□□□□□ -1.37
SMG1-214ENST00000568038 SFTPBP07988 381 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 PGA5P0DJD9 388 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 CD37P11049 281 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 SERPINA2P20848 420 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 GLRA1P23415 457 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 CD80P33681 288 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 CFHR2P36980 270 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 NPBWR2P48146 333 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 RORCP51449 518 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 SNU13P55769 128 aaKnown RBP6.48□□□□□ -1.37
SMG1-214ENST00000568038 RIN1Q13671 783 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 RSU1Q15404 277 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 ZNF181Q2M3W8 571 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 SLC22A6Q4U2R8 563 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 FAM166AQ6J272 317 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 SFXN4Q6P4A7 337 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 SAXO1Q8IYX7 474 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 C1orf87Q8N0U7 546 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 GCSAMQ8N6F7 178 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 ZNF525Q8N782 197 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 ZSCAN4Q8NAM6 433 aaPredicted RBP6.48□□□□□ -1.37
SMG1-214ENST00000568038 POC1AQ8NBT0 407 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 DEFB108BQ8NET1 73 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 PXT1Q8NFP0 134 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 OR51D1Q8NGF3 324 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 OR6M1Q8NGM8 313 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 OR10Z1Q8NGY1 313 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 CHAC2Q8WUX2 184 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 SLC25A28Q96A46 364 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 CEP19Q96LK0 163 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 BARHL1Q9BZE3 327 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 WDR13Q9H1Z4 485 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 BANF2Q9H503 90 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 BATF3Q9NR55 127 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 RBFOX1Q9NWB1 397 aaKnown RBP6.48□□□□□ -1.37
SMG1-214ENST00000568038 DNAJB11Q9UBS4 358 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 STEAP1Q9UHE8 339 aa6.48□□□□□ -1.37
SMG1-214ENST00000568038 COL12A1Q99715 3063 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 PPIAL4EA0A075B759 164 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 A0A1W2PP11 408 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 ISPDA4D126 451 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 SRRM5B3KS81 715 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 CLDN25C9JDP6 229 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 PPIAL4DF5H284 164 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 IFNL4K9M1U5 179 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 ZNF701M0R085 212 aaPredicted RBP6.47□□□□□ -1.37
SMG1-214ENST00000568038 CRTAPO75718 401 aaPredicted RBP6.47□□□□□ -1.37
SMG1-214ENST00000568038 KDM4BO94953 1096 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 PAHP00439 452 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 LHBP01229 141 aa6.47□□□□□ -1.37
SMG1-214ENST00000568038 PPIAL4FP0DN26 164 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms