RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 DUSP15Q9H1R2 295 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 OR1A1Q9P1Q5 309 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 GPR55Q9Y2T6 319 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 J3KTA2 159 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 KLK10O43240 276 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 TMIGD3P0DMS9 266 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 GDF1P27539 372 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 GNG4P50150 75 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 DCDP81605 110 aaKnown RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 LAIR1Q6GTX8 287 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 MRPL54Q6P161 138 aaKnown RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 DLEU7Q6UYE1 221 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 SH2D5Q6ZV89 423 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 TMEM178AQ8NBL3 297 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 NIPSNAP1Q9BPW8 284 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 PLEKHB1Q9UF11 243 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 KCND3Q9UK17 655 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 IGHV3-15A0A0B4J1V0 119 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 DEGS1O15121 323 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 PMELP40967 661 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 RAB38P57729 211 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 RPS16P62249 146 aaKnown RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 SLC38A5Q8WUX1 472 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ORAOV1Q8WV07 137 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 S1PR3Q99500 378 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 TMEM59Q9BXS4 323 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 PILRBQ9UKJ0 227 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 FOXJ3Q9UPW0 622 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 VDAC3Q9Y277 283 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 KIAA0100Q14667 2235 aaKnown RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 FAM171A2A8MVW0 826 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 M0QYG6 137 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 FCN1O00602 326 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ZNHIT1O43257 154 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 PPP1R3DO95685 299 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 DPP4P27487 766 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 EFNA3P52797 238 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 FABP5Q01469 135 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 OR1Q1Q15612 314 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ZNF385BQ569K4 471 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ZNF660Q6AZW8 331 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 NAT6Q93015 286 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ZNF775Q96BV0 537 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 NEIL1Q96FI4 390 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 NRSN2Q9GZP1 204 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 RNF167Q9H6Y7 350 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 SRD5A3Q9H8P0 318 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ZNF256Q9Y2P7 627 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 KLF2Q9Y5W3 355 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 ANKRD30BLA7E2S9 258 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 HMGN2P05204 90 aaKnown RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 FUT1P19526 365 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 GPM6AP51674 278 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 LIM2P55344 173 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 RPS23P62266 143 aaKnown RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 EXT1Q16394 746 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 FBLN7Q53RD9 439 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 C1orf185Q5T7R7 199 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 PNKDQ8N490 385 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 TNFRSF12AQ9NP84 129 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 NTMQ9P121 344 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 AMDHD2Q9Y303 409 aa5.34□□□□□ -1.55
CNOT1-211ENST00000567188 SOX21Q9Y651 276 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-211ENST00000567188 SPTY2D1-AS1A0A0U1RR47 76 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 TMEM238LA0A1B0GVL6 79 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 TMEM269A0A1B0GVZ9 245 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 A6NJY4 79 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 DUS4LO95620 317 aaKnown RBP5.34□□□□□ -1.56
CNOT1-211ENST00000567188 OR8G3PP0DMU2 310 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 PEBP1P30086 187 aaKnown RBP5.34□□□□□ -1.56
CNOT1-211ENST00000567188 LCN2P80188 198 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.56
CNOT1-211ENST00000567188 SLC25A30Q5SVS4 291 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 DEGS2Q6QHC5 323 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 OR2Y1Q8NGV0 311 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 TMEFF2Q9UIK5 374 aaPredicted RBP5.34□□□□□ -1.56
CNOT1-211ENST00000567188 SLC5A6Q9Y289 635 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 SLC17A4Q9Y2C5 497 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 SEC16AO15027 2179 aa5.34□□□□□ -1.56
CNOT1-211ENST00000567188 TRAV30A0A087WSZ9 112 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 TRAV34A0A0B4J273 112 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 IGHV5-10-1A0A0J9YXX1 117 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 SHISA8B8ZZ34 492 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 TGFBR1P36897 503 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 JOSD1Q15040 202 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-211ENST00000567188 STPG1Q5TH74 334 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 SLCO4C1Q6ZQN7 724 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 MUC20Q8N307 709 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-211ENST00000567188 WDR34Q96EX3 536 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 GPA33Q99795 319 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 CNTD2Q9H8S5 307 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 CLEC2DQ9UHP7 191 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 PRSS50Q9UI38 385 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 FAM24AA6NFZ4 105 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 TARM1B6A8C7 271 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 PIAS2O75928 621 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 SCGB1C2P0DMR2 95 aa5.33□□□□□ -1.56
CNOT1-211ENST00000567188 AKR1C3P42330 323 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms