RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 SERPINA2P20848 420 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 SSTR2P30874 369 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 RAB25P57735 213 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 FGF12P61328 243 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 DGCR2P98153 550 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 IL13RA2Q14627 380 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 MPV17LQ2QL34 196 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 ALKBH6Q3KRA9 238 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 SPIN3Q5JUX0 258 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 ZNF57Q68EA5 555 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-207ENST00000566095 Q6ZR03 302 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 PEG10Q86TG7 708 aaKnown RBP8.34□□□□□ -1.07
SF3B3-207ENST00000566095 DTX2Q86UW9 622 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 LRP11Q86VZ4 500 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 POC1AQ8NBT0 407 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 SCCPDHQ8NBX0 429 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 OR52I2Q8NH67 350 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 RAB3CQ96E17 227 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 NEDD4LQ96PU5 975 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 OR2V2Q96R30 315 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 RIMS4Q9H426 269 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-207ENST00000566095 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 UBTD1Q9HAC8 227 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 MYOZ1Q9NP98 299 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-207ENST00000566095 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
SF3B3-207ENST00000566095 CADP27708 2225 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 ZSCAN5BA6NJL1 495 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 CEACAM18A8MTB9 384 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 MFNGO00587 321 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SIAH2O43255 324 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SPRY1O43609 319 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 LILRA1O75019 489 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SNAPC5O75971 98 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 DIRAS3O95661 229 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 GLRA1P23415 457 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 DTYMKP23919 212 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 LOXP28300 417 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 EFNB2P52799 333 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 RBM11P57052 281 aaKnown RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 MRPS11P82912 194 aaKnown RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 RBM39Q14498 530 aaKnown RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SP5Q6BEB4 398 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 Q6ZS49 121 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 BTN2A1Q7KYR7 527 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 FAM58AQ8N1B3 248 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 ARRDC1Q8N5I2 433 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 CHST4Q8NCG5 386 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 PPP1R35Q8TAP8 253 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 Q8TCH9 128 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 ITLN1Q8WWA0 313 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 ST8SIA4Q92187 359 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 EMG1Q92979 244 aaKnown RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SLAMF9Q96A28 289 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 C14orf79Q96F83 325 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 HS3ST6Q96QI5 342 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 CACNG6Q9BXT2 260 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 SELENOIQ9C0D9 397 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 CLEC4MQ9H2X3 399 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 DLL4Q9NR61 685 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 C1orf123Q9NWV4 160 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 TREM2Q9NZC2 230 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 MYEF2Q9P2K5 600 aaKnown RBP8.33□□□□□ -1.08
SF3B3-207ENST00000566095 RNF7Q9UBF6 113 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 DNAJB11Q9UBS4 358 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 MAST4O15021 2626 aa8.33□□□□□ -1.08
SF3B3-207ENST00000566095 PLCE1Q9P212 2302 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 IGKV1-27A0A075B6S5 117 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 C7orf66A4D0T2 115 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 H0YL77 283 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 H7C1Q1 480 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 CDIPTO14735 213 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 SH2D1BO14796 132 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 PFDN1O60925 122 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 PLAUP00749 431 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 KNG1P01042 644 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 TCRBP04435 133 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 CD3GP09693 182 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 PGA5P0DJD9 388 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 PRKACAP17612 351 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 ECI1P42126 302 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 KCNJ3P48549 501 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 RBMS2Q15434 407 aaKnown RBP8.32□□□□□ -1.08
SF3B3-207ENST00000566095 HFEQ30201 348 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 CDNFQ49AH0 187 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 VAX1Q5SQQ9 334 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 SHEQ5VZ18 495 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 Q6ZTK2 550 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 CALHM1Q8IU99 346 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 SNX29P2Q8IUI4 249 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 LRRC29Q8WV35 223 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 ASB13Q8WXK3 278 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 DVL3Q92997 716 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-207ENST00000566095 TIMD4Q96H15 378 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 PRRT1Q99946 306 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 VRK1Q99986 396 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-207ENST00000566095 NRIP2Q9BQI9 281 aa8.32□□□□□ -1.08
SF3B3-207ENST00000566095 BARX1Q9HBU1 254 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-207ENST00000566095 HRASLSQ9HDD0 168 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms