RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PRDX2P32119 198 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 S100A5P33763 92 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 PITPNBP48739 271 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RPS27AP62979 156 aaKnown RBP6.53□□□□□ -1.36
CDH1-208ENST00000565810 QRFPP83859 136 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 SCN1BQ07699 218 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 IKZF1Q13422 519 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 ZNF146Q15072 292 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 TAF9Q16594 264 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 MPV17LQ2QL34 196 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 CNPY1Q3B7I2 92 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 TMEM155Q4W5P6 130 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 NHLRC3Q5JS37 347 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 AVPI1Q5T686 147 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 SHEQ5VZ18 495 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RAB12Q6IQ22 244 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 DCDC5Q6ZRR9 648 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 SAMD12Q8N8I0 201 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 TMEM104Q8NE00 496 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 C19orf18Q8NEA5 215 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 OR5T2Q8NGG2 359 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 OR5H6Q8NGV6 325 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 C10orf105Q8TEF2 133 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RAB40AQ8WXH6 277 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 S100A16Q96FQ6 103 aaKnown RBP6.53□□□□□ -1.36
CDH1-208ENST00000565810 MED30Q96HR3 178 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 C1orf147Q96MC9 270 aaPredicted RBP6.53□□□□□ -1.36
CDH1-208ENST00000565810 NEDD4LQ96PU5 975 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 GAL3ST1Q99999 423 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 TM2D1Q9BX74 207 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 SLIRPQ9GZT3 109 aaKnown RBP6.53□□□□□ -1.36
CDH1-208ENST00000565810 DNTTIP1Q9H147 329 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 ATG5Q9H1Y0 275 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 MMP27Q9H306 513 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 ZNF665Q9H7R5 613 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 SPACA1Q9HBV2 294 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 TMEM165Q9HC07 324 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 DIABLOQ9NR28 239 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RHBDL2Q9NX52 303 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 MIOXQ9UGB7 285 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 A3GALT2U3KPV4 340 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 A0A0A6YYH2 397 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 A6NJ64 397 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 FAM25AB3EWG3 89 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 FAM25CB3EWG5 89 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 FAM25GB3EWG6 89 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 GEMIN2O14893 280 aaKnown RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 TMPRSS2O15393 492 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 ADAM20O43506 726 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 IGHV2-70P01814 119 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 APOA1P02647 267 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 HEXAP06865 529 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 DUSP1P28562 367 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 BLVRBP30043 206 aaPredicted RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 TALDO1P37837 337 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 VEGFCP49767 419 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 RBM11P57052 281 aaKnown RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 HOXA4Q00056 320 aaPredicted RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 UNC119Q13432 240 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 RBM39Q14498 530 aaKnown RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 ARL6IP1Q15041 203 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 ZMYND11Q15326 602 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 PIGYQ3MUY2 71 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 UBE2NLQ5JXB2 153 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 Q5PR19 223 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 ATAD3CQ5T2N8 411 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 ATPAF1Q5TC12 328 aaPredicted RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 STUMQ69YW2 141 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 CHST4Q8NCG5 386 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 ANGPTL6Q8NI99 470 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 SEH1LQ96EE3 360 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 Q96M66 194 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 FOXC2Q99958 501 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 TMEM246Q9BRR3 403 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 BPESC1Q9GZL8 116 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 NXF2Q9GZY0 626 aaKnown RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 LPAR5Q9H1C0 372 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 KCNK15Q9H427 330 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 SEBOXQ9HB31 216 aaPredicted RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 PEX16Q9Y5Y5 336 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 UTP20O75691 2785 aaKnown RBP6.52□□□□□ -1.37
CDH1-208ENST00000565810 CELSR2Q9HCU4 2923 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 USF3Q68DE3 2245 aa6.52□□□□□ -1.37
CDH1-208ENST00000565810 CSMD2Q7Z408 3487 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 FBN2P35556 2912 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 FUOMA2VDF0 154 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 CEACAM18A8MTB9 384 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 MCRIP1C9JLW8 97 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 SIRPB1O00241 398 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 CTDSP2O14595 271 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 NDUFB3O43676 98 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 HPGDSO60760 199 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 PDCD6O75340 191 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 OR2H2O95918 312 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 GLAP06280 429 aa6.51□□□□□ -1.37
CDH1-208ENST00000565810 RPS2P15880 293 aaKnown RBP6.51□□□□□ -1.37
CDH1-208ENST00000565810 FUT3P21217 361 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms