RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 MCUBQ9NWR8 336 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 NHSQ6T4R5 1651 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 ITGB4P16144 1822 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 BRCA2P51587 3418 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 C4BP0C0L5 1744 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 TOGARAM1Q9Y4F4 1720 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 N4BP2Q86UW6 1770 aaPredicted RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 SZT2Q5T011 3432 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 COL4A1P02462 1669 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 SLX4Q8IY92 1834 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 TRAV25A0A0B4J276 109 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 IZUMO1RA6ND01 250 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 SDHAF1A6NFY7 115 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 H0YIV9 168 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 C15orf65H3BRN8 121 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 CTAG2O75638 210 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 TUBG1P23258 451 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 CXCR1P25024 350 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 KLF3P57682 345 aaPredicted RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 OR12D2P58182 307 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 OR2B8PP59922 312 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 FMODQ06828 376 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 INCA1Q0VD86 236 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 HIKESHIQ53FT3 197 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 FAM104BQ5XKR9 115 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 SLC30A8Q8IWU4 369 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 LY6G5BQ8NDX9 201 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 OR4D6Q8NGJ1 314 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 ACTL9Q8TC94 416 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 SFXN5Q8TD22 340 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 APH1AQ96BI3 265 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 OTUB2Q96DC9 234 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 YIPF6Q96EC8 236 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 SNF8Q96H20 258 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 FAM19A4Q96LR4 140 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 JSRP1Q96MG2 331 aaPredicted RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 RDH12Q96NR8 316 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 BLZF1Q9H2G9 400 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 TDRD3Q9H7E2 651 aaKnown RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 C8orf33Q9H7E9 229 aaPredicted RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 SND1-IT1Q9HBX3 110 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 CD209Q9NNX6 404 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 OR2S2Q9NQN1 319 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 TUBG2Q9NRH3 451 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 TMEM100Q9NV29 134 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 STX18Q9P2W9 335 aaKnown RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 MCTS1Q9ULC4 181 aaKnown RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 NDRG2Q9UN36 371 aaKnown RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 SAMHD1Q9Y3Z3 626 aaKnown RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 MON2Q7Z3U7 1717 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 A0A0C4DFX4 3053 aa1.62□□□□□ -2.15
PALB2-203ENST00000565038 BAZ2AQ9UIF9 1905 aaKnown RBP1.62□□□□□ -2.15
PALB2-203ENST00000565038 KIAA1671Q9BY89 1806 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 PLEKHG2Q9H7P9 1386 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 LY75O60449 1722 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 DOT1LQ8TEK3 1739 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 LOC100653049A0A140TA62 436 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 A0A1B0GTQ1 180 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 TMEM72A0PK05 275 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 SIVA1O15304 175 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 AQP9O43315 295 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 HSBP1O75506 76 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 KRT34O76011 436 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 KCNK2O95069 426 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 PTHP01270 115 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 OR5AC1P0C628 307 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 PRSS3P35030 304 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 GPR1P46091 355 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 RAD51Q06609 339 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 DNAJC3Q13217 504 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 PDZD11Q5EBL8 140 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 BEX5Q5H9J7 111 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 LDLRAD2Q5SZI1 272 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 CPTPQ5TA50 214 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 STEAP4Q687X5 459 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 ZNF470Q6ECI4 717 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 FA2HQ7L5A8 372 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 LRRC8AQ8IWT6 810 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 ZNF321PQ8N8H1 164 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 INO80EQ8NBZ0 244 aaPredicted RBP1.61□□□□□ -2.15
PALB2-203ENST00000565038 MUC7Q8TAX7 377 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 PIH1D2Q8WWB5 315 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 DERL3Q96Q80 235 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 TBL1XR1Q9BZK7 514 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 NAA50Q9GZZ1 169 aaKnown RBP1.61□□□□□ -2.15
PALB2-203ENST00000565038 DEFB129Q9H1M3 183 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 INIPQ9NRY2 104 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 ADA2Q9NZK5 511 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 CES1P1Q9UKY3 287 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 LTN1O94822 1766 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 MRC1P22897 1456 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 THADAQ6YHU6 1953 aa1.61□□□□□ -2.15
PALB2-203ENST00000565038 UBR3Q6ZT12 1888 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 C4AP0C0L4 1744 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ITSN1Q15811 1721 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 COL24A1Q17RW2 1714 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 KIAA1551Q9HCM1 1747 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 IGLV10-54A0A075B6I4 117 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 IGHV6-1A0A0B4J1U7 121 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 A0A0G2JMP0 313 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms