RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CAV3P56539 151 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 ZP1P60852 638 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 SCN1BQ07699 218 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 GPR176Q14439 515 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 INSL4Q14641 139 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 DGUOKQ16854 277 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 GLT8D1Q68CQ7 371 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 ASCC1Q8N9N2 400 aaKnown RBP13.26□□□□□ -0.29
RAB40C-208ENST00000564703 TSPAN14Q8NG11 270 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 PPP1R35Q8TAP8 253 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 NANPQ8TBE9 248 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 CNTD2Q9H8S5 307 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 SEBOXQ9HB31 216 aaPredicted RBP13.26□□□□□ -0.29
RAB40C-208ENST00000564703 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 A0A1B0GW55 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 ZNF780AO75290 641 aaPredicted RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 HAND1O96004 215 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 SFTPBP07988 381 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 UCHL1P09936 223 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L2P0CJ85 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L3P0CJ86 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L4P0CJ87 422 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L5P0CJ88 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L6P0CJ89 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L7P0CJ90 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 SRD5A1P18405 259 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUSP1P28562 367 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 OR3A4PP47883 348 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 CEBPDP49716 269 aaPredicted RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 COL10A1Q03692 680 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 ZNF146Q15072 292 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4L9Q6RFH8 374 aaPredicted RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DMRTB1Q96MA1 342 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 NR1H4Q96RI1 486 aaPredicted RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 TMPRSS13Q9BYE2 586 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 FAM234AQ9H0X4 552 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 DUX4Q9UBX2 424 aa13.25□□□□□ -0.29
RAB40C-208ENST00000564703 SF3B6Q9Y3B4 125 aaKnown RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 ZNF469Q96JG9 3925 aaPredicted RBP13.25□□□□□ -0.29
RAB40C-208ENST00000564703 A0A1W2PQ09 198 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 DEGS1O15121 323 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 SC5DO75845 299 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 CDRT1O95170 752 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 PPIAL4GP0DN37 164 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 SELLP14151 372 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 GABRR1P24046 479 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 RANBP1P43487 201 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 FGF12P61328 243 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 FABP5Q01469 135 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 PAX8Q06710 450 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 SCGB2A2Q13296 93 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 NEDD8Q15843 81 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 FAM27D1Q5T7N8 215 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 ELP2Q6IA86 826 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 CRIP3Q6Q6R5 217 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 ASCL4Q6XD76 172 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 TMEM91Q6ZNR0 172 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 GDPD3Q7L5L3 318 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 C1QL2Q7Z5L3 287 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 CMTM4Q8IZR5 234 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 TBC1D15Q8TC07 691 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 MUL1Q969V5 352 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 SNX22Q96L94 193 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 DCTN5Q9BTE1 182 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 NDUFB11Q9NX14 153 aa13.24□□□□□ -0.29
RAB40C-208ENST00000564703 RPUSD1Q9UJJ7 312 aaKnown RBP13.24□□□□□ -0.29
RAB40C-208ENST00000564703 MRPS28Q9Y2Q9 187 aaKnown RBP13.24□□□□□ -0.29
RAB40C-208ENST00000564703 A0A1W2PPH5 198 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 C22orf46C9J442 243 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 K7N7A8 449 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 IFNA2P01563 188 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 TK1P04183 234 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 ZNF44P15621 663 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 GALP22466 123 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 CALRP27797 417 aaKnown RBP13.23□□□□□ -0.29
RAB40C-208ENST00000564703 PSMD7P51665 324 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 PAX2Q02962 417 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 BLMHQ13867 455 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 SSX1Q16384 188 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 GLIPR1L1Q6UWM5 242 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 OR10K1Q8NGX5 313 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 SSR3Q9UNL2 185 aa13.23□□□□□ -0.29
RAB40C-208ENST00000564703 TRBV23-1A0A0A0MS06 115 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 TRDV1A0A1B0GX56 115 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 MAGEA13PA6NCF6 341 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 TOX4O94842 621 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 AVPP01185 164 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 FAM157CP0CG43 387 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 GTF2F2P13984 249 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 SERPINA2P20848 420 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 MYL9P24844 172 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 RIPPLY3P57055 190 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 ARF6P62330 175 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 RPL31P62899 125 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms