RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 HHLA2Q9UM44 414 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 C17orf98A8MV24 154 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 J3QRE1 110 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 TSPAN15O95858 294 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 PEX2P28328 305 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 FAM189A2Q15884 450 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 SLC25A30Q5SVS4 291 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 TRAPPC6BQ86SZ2 158 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 LHFPL3Q86UP9 236 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 ENTHD1Q8IYW4 607 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 OR5D18Q8NGL1 313 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 OR13D1Q8NGV5 346 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 MRPL48Q96GC5 212 aaKnown RBP14.34□□□□□ -0.11
NME3-205ENST00000563854 ZNF714Q96N38 554 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 OPALINQ96PE5 141 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 C9orf16Q9BUW7 83 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 ALG8Q9BVK2 526 aa14.34□□□□□ -0.11
NME3-205ENST00000563854 TRBV2A0A0J9YWF9 115 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 hADV38S2A0JD32 116 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 SIRPB1O00241 398 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 ISG15P05161 165 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 IGHV1-8P0DP01 117 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 DBTP11182 482 aaKnown RBP14.33□□□□□ -0.12
NME3-205ENST00000563854 ALKBH1Q13686 389 aaKnown RBP14.33□□□□□ -0.12
NME3-205ENST00000563854 FDX2Q6P4F2 183 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 UTS2BQ765I0 119 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 TCF23Q7RTU1 214 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 DYNAPQ8N1N2 210 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 OR52N4Q8NGI2 321 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 SPSB1Q96BD6 273 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 AMBNQ9NP70 447 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 RAB18Q9NP72 206 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 ABCB10Q9NRK6 738 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 GLS2Q9UI32 602 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 EXOGQ9Y2C4 368 aaKnown RBP14.33□□□□□ -0.12
NME3-205ENST00000563854 GSTK1Q9Y2Q3 226 aa14.33□□□□□ -0.12
NME3-205ENST00000563854 CHST1O43916 411 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 RAB13P51153 203 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 CCR9P51686 369 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 MEF2CQ06413 473 aaPredicted RBP14.32□□□□□ -0.12
NME3-205ENST00000563854 SSX2Q16385 188 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 AANATQ16613 207 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 HIST2H2BDQ6DRA6 164 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 C11orf44Q8N8P7 122 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 OR4S1Q8NGB4 309 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 OR2T6Q8NHC8 308 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 FAM110DQ8TAY7 271 aaPredicted RBP14.32□□□□□ -0.12
NME3-205ENST00000563854 FOXRED1Q96CU9 486 aaPredicted RBP14.32□□□□□ -0.12
NME3-205ENST00000563854 NPFFR1Q9GZQ6 430 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 ISG20L2Q9H9L3 353 aaKnown RBP14.32□□□□□ -0.12
NME3-205ENST00000563854 EXOSC4Q9NPD3 245 aaKnown RBP14.32□□□□□ -0.12
NME3-205ENST00000563854 FBLN5Q9UBX5 448 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 MYRFQ9Y2G1 1151 aa14.32□□□□□ -0.12
NME3-205ENST00000563854 OR4C45A6NMZ5 311 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 ODF3BA8MYP8 253 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 PSPNO60542 156 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 RBP4P02753 201 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 HCKP08631 526 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 SCN1BQ07699 218 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 PDZK1IP1Q13113 114 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 GALEQ14376 348 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 C2orf68Q2NKX9 166 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 ZBTB49Q6ZSB9 765 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 Q6ZTK2 550 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 RNF144BQ7Z419 303 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 TMEM219Q86XT9 240 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 C10orf67Q8IYJ2 551 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 NDNFQ8TB73 568 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 SLC29A1Q99808 456 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 S100A14Q9HCY8 104 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 HMG20AQ9NP66 347 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 ING3Q9NXR8 418 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 FOXJ3Q9UPW0 622 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 TBL2Q9Y4P3 447 aaKnown RBP14.31□□□□□ -0.12
NME3-205ENST00000563854 PCDHGB5Q9Y5G0 923 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 LINC00312Q9Y6C7 94 aa14.31□□□□□ -0.12
NME3-205ENST00000563854 IGKV1-12A0A0C4DH73 117 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 E9PQ18 207 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 MGST3O14880 152 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 FADS2O95864 444 aaKnown RBP14.3□□□□□ -0.12
NME3-205ENST00000563854 IGKV1D-12P01611 117 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 VSIG10L2P0DP72 767 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 GABRB1P18505 474 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 OR3A1P47881 315 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 SPIN3Q5JUX0 258 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 LPCAT4Q643R3 524 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 ZNF626Q68DY1 528 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 KLHDC1Q8N7A1 406 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 PIFOQ8TCI5 191 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 RPS4Y2Q8TD47 263 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 TSEN15Q8WW01 171 aaKnown RBP14.3□□□□□ -0.12
NME3-205ENST00000563854 Q96MT0 163 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 MYCBPQ99417 103 aaPredicted RBP14.3□□□□□ -0.12
NME3-205ENST00000563854 COMMD4Q9H0A8 199 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 HILPDAQ9Y5L2 63 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 SESN1Q9Y6P5 492 aa14.3□□□□□ -0.12
NME3-205ENST00000563854 LOC100130705A0A1B0GUX0 176 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 FAM90A8PA6NJQ4 464 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 SH2D1BO14796 132 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 MPZL2O60487 215 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms