RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 GABARAPH6UMI1 98 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 MFNGO00587 321 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 NXPH2O95156 264 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 LHBP01229 141 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 MELTFP08582 738 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 CD3GP09693 182 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A15PP0C7V4 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A13PP0C7W8 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A14PP0C7W9 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A24PP0C7X0 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 HIST1H1DP16402 221 aaKnown RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 TNFRSF1AP19438 455 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 GLRA1P23415 457 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 DUSP1P28562 367 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 CFHR2P36980 270 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 IL13RA2Q14627 380 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 STEAP3Q658P3 488 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 SP5Q6BEB4 398 aaPredicted RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 ACP7Q6ZNF0 438 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 C6orf201Q7Z4U5 140 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 TGIF2LYQ8IUE0 185 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 OR52I2Q8NH67 350 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 Q8TCH9 128 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 TRIM63Q969Q1 353 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 ERGIC1Q969X5 290 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 SEH1LQ96EE3 360 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 POM121Q96HA1 1249 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 DECR2Q9NUI1 292 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 TREM2Q9NZC2 230 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 A0A1W2PQ09 198 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 TPD52L2O43399 206 aaKnown RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 CHATP28329 748 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 PRSS3P35030 304 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 PPOXP50336 477 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 MRPS10P82664 201 aaKnown RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 PCGF3Q3KNV8 242 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 NKAPLQ5M9Q1 402 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 AGAP6Q5VW22 663 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 Q6P435 159 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 BRICD5Q6PL45 260 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 DTX2Q86UW9 622 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FCAMRQ8WWV6 532 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 TRAF4Q9BUZ4 470 aaPredicted RBP8.56□□□□□ -1.04
SMG1-208ENST00000563448 EGLN1Q9GZT9 426 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 UBTD1Q9HAC8 227 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 SAP30LQ9HAJ7 183 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAIMQ9NVQ4 179 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 HSF4Q9ULV5 492 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 PPP1R3CQ9UQK1 317 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 MEIS3P1A6NDR6 274 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 ORC5O43913 435 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 OR7C1O76099 320 aaPredicted RBP8.55□□□□□ -1.04
SMG1-208ENST00000563448 CYB5R3P00387 301 aaPredicted RBP8.55□□□□□ -1.04
SMG1-208ENST00000563448 HPXP02790 462 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 ZNF146Q15072 292 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 MPV17LQ2QL34 196 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 LINC00596Q86U02 117 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 GPX8Q8TED1 209 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 VRK1Q99986 396 aaPredicted RBP8.55□□□□□ -1.04
SMG1-208ENST00000563448 SULT4A1Q9BR01 284 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 PLEKHJ1Q9NW61 149 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 DCAF16Q9NXF7 216 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 RASL12Q9NYN1 266 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 RNF7Q9UBF6 113 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 KLK11Q9UBX7 282 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 CACNG2Q9Y698 323 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 KIAA2026Q5HYC2 2103 aa8.55□□□□□ -1.04
SMG1-208ENST00000563448 SULT1C2O00338 296 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 SSX5O60225 188 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 PDCD6O75340 191 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 FUT3P21217 361 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 GDNFP39905 211 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 CEBPDP49716 269 aaPredicted RBP8.54□□□□□ -1.04
SMG1-208ENST00000563448 TLE4Q04727 773 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 SCN1BQ07699 218 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 IKZF1Q13422 519 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 PNLIPRP3Q17RR3 467 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 SPIN3Q5JUX0 258 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 FAM201AQ5SY85 155 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 ATAD3CQ5T2N8 411 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 HACD4Q5VWC8 232 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 TRIQKQ629K1 86 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 BOLLQ8N9W6 283 aaKnown RBP8.54□□□□□ -1.04
SMG1-208ENST00000563448 OR11L1Q8NGX0 322 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 NUDCD2Q8WVJ2 157 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 NEDD4LQ96PU5 975 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 IFT22Q9H7X7 185 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 RCC2Q9P258 522 aaKnown RBP8.54□□□□□ -1.04
SMG1-208ENST00000563448 ITGB1BP2Q9UKP3 347 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 LAMP3Q9UQV4 416 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 RBMX2Q9Y388 322 aaKnown RBP8.54□□□□□ -1.04
SMG1-208ENST00000563448 H7C417 338 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 PFDN1O60925 122 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 OR2H2O95918 312 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 TFF1P04155 84 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms