RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 APH1AQ96BI3 265 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 DNAJC19Q96DA6 116 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 MICU1Q9BPX6 476 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 NDFIP1Q9BT67 221 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 DERL2Q9GZP9 239 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SLC38A1Q9H2H9 487 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 UGT1A10Q9HAW8 530 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 TMBIM4Q9HC24 238 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SLC40A1Q9NP59 571 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 MRPL40Q9NQ50 206 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 OR2S2Q9NQN1 319 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 INPP5EQ9NRR6 644 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 FGFR1OP2Q9NVK5 253 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 EURLQ9NYK6 297 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 VAPAQ9P0L0 249 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SLC17A7Q9P2U7 560 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 XCL2Q9UBD3 114 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 RAB23Q9ULC3 237 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 MMP17Q9ULZ9 603 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 PPIL1Q9Y3C6 166 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 YTHDF2Q9Y5A9 579 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 COL6A6A6NMZ7 2263 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ITPR1Q14643 2758 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SDK2Q58EX2 2172 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 HELZ2Q9BYK8 2649 aaKnown RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SCN8AQ9UQD0 1980 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 A0A1W2PRG6 482 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 PLAC8L1A1L4L8 177 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 VPS37CA5D8V6 355 aaPredicted RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 F8VP50 259 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 H3BN98 237 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 H3BQV1 296 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SMLR1H3BR10 107 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SLC16A4O15374 487 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 HCRTO43612 131 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TRAPPC3O43617 180 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF189O75820 626 aaPredicted RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TRAPPC6AO75865 159 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 RBBP9O75884 186 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SCELO95171 688 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 NSA2O95478 260 aaKnown RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 RAB3DO95716 219 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 LSM8O95777 96 aaKnown RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 C6orf47O95873 294 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 FGGP02679 453 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 BGLAPP02818 100 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 IFNA6P05013 189 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 C2P06681 752 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SERPINE2P07093 398 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF806P0C7X5 589 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 IGHV3-43DP0DP04 118 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 OMGP23515 440 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 KDELR2P33947 212 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 CLDN6P56747 220 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 OR2B6P58173 313 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 AP3S2P59780 193 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 UBE2KP61086 200 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ATP6V0D1P61421 351 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 STXBP1P61764 594 aaKnown RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 RPL10AP62906 217 aaKnown RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 REG3AQ06141 175 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TWF1Q12792 350 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ECH1Q13011 328 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 PDIA2Q13087 525 aaKnown RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ILKQ13418 452 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 FLOT2Q14254 428 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNHIT3Q15649 155 aaPredicted RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZBED5Q49AG3 693 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 COX19Q49B96 90 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 CLVS2Q5SYC1 327 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SDHAF4Q5VUM1 108 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 DUPD1Q68J44 220 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TENM4Q6N022 2769 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 UQCC3Q6UW78 93 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ENPP6Q6UWR7 440 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 CLEC18BQ6UXF7 455 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ABHD13Q7L211 337 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TMEM150AQ86TG1 271 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 NT5DC3Q86UY8 548 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 UNC93AQ86WB7 457 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SLC13A5Q86YT5 568 aaPredicted RBP1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF547Q8IVP9 402 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 CMTM1Q8IZ96 169 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 IQCKQ8N0W5 287 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 DAW1Q8N136 415 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 SYS1Q8N2H4 156 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TRAM1L1Q8N609 369 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 EID2Q8N6I1 236 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 FAM86B1Q8N7N1 296 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF615Q8N8J6 731 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF738Q8NE65 137 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 DEFB124Q8NES8 71 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 TTLQ8NG68 377 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 OR52H1Q8NGJ2 320 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 NUBPLQ8TB37 319 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 PLPPR1Q8TBJ4 325 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 CDS1Q92903 461 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 OTUB2Q96DC9 234 aa1.7□□□□□ -2.14
HDGFL3-202ENST00000562702 AURKBQ96GD4 344 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms