RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SELLP14151 372 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 SRMP19623 302 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 FGF9P31371 208 aaPredicted RBP11.11□□□□□ -0.63
CDH1-204ENST00000562118 PRDX2P32119 198 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 OR3A4PP47883 348 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 POU3F4P49335 361 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 PAX5Q02548 391 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 CR1LQ2VPA4 569 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 C1orf100Q5SVJ3 147 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 CD276Q5ZPR3 534 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 CEACAM19Q7Z692 300 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 FGFRL1Q8N441 504 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 TSPAN14Q8NG11 270 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 GFI1Q99684 422 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 SHARPINQ9H0F6 387 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 YAE1D1Q9NRH1 226 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 LPAR3Q9UBY5 353 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 OR5V1Q9UGF6 321 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
CDH1-204ENST00000562118 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 A0A087WXM4 84 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 A0A1W2PPK0 400 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 K7N7A8 449 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 ARL6IP5O75915 188 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 PLATP00750 562 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 SMIM18P0DKX4 95 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 MMP9P14780 707 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
CDH1-204ENST00000562118 IL13RA2Q14627 380 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 HSD17B12Q53GQ0 312 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 Q6P435 159 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 C17orf107Q6ZR85 190 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 Q71RC1 249 aaPredicted RBP11.1□□□□□ -0.63
CDH1-204ENST00000562118 TBC1D15Q8TC07 691 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 TNFAIP8L1Q8WVP5 186 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 EMG1Q92979 244 aaKnown RBP11.1□□□□□ -0.63
CDH1-204ENST00000562118 TMEM203Q969S6 136 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 DCTN5Q9BTE1 182 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 CNTD2Q9H8S5 307 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 LPAR2Q9HBW0 351 aa11.1□□□□□ -0.63
CDH1-204ENST00000562118 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
CDH1-204ENST00000562118 TRBV23-1A0A0A0MS06 115 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 TRAV1-2A0A0B4J238 106 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 SHISA3A0PJX4 238 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 SLC22A1O15245 554 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 NDUFB3O43676 98 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 ENSAO43768 121 aaKnown RBP11.09□□□□□ -0.63
CDH1-204ENST00000562118 TK1P04183 234 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 CSN2P05814 226 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 LIPFP07098 398 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 CHRM2P08172 466 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 OCMP0CE72 109 aaPredicted RBP11.09□□□□□ -0.63
CDH1-204ENST00000562118 TMEM225BP0DP42 221 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 GMFBP60983 142 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 LRRC10Q5BKY1 277 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 DCAF12L2Q5VW00 463 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 BTN2A1Q7KYR7 527 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 KIR3DL3Q8N743 410 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 ZNRF1Q8ND25 227 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 OR4D6Q8NGJ1 314 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 FOXRED1Q96CU9 486 aaPredicted RBP11.09□□□□□ -0.63
CDH1-204ENST00000562118 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
CDH1-204ENST00000562118 SLC25A10Q9UBX3 287 aaPredicted RBP11.09□□□□□ -0.63
CDH1-204ENST00000562118 TMEM82A0PJX8 343 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 PSPNO60542 156 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 ZNF780AO75290 641 aaPredicted RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 HAND1O96004 215 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 MAS1P04201 325 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 PRKACAP17612 351 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 PSMB9P28065 219 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 CEBPDP49716 269 aaPredicted RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 QRFPP83859 136 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 COL10A1Q03692 680 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 FIP1L1Q6UN15 594 aaKnown RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 OR8H2Q8N162 312 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 BATF2Q8N1L9 274 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 PNLDC1Q8NA58 520 aaKnown RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 CHST4Q8NCG5 386 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 SLC25A28Q96A46 364 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 UPRTQ96BW1 309 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 MRPS24Q96EL2 167 aaKnown RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 POM121Q96HA1 1249 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 SNX22Q96L94 193 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 NKX3-1Q99801 234 aaPredicted RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 NUDT16L1Q9BRJ7 211 aaKnown RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 UNKLQ9H9P5 680 aaKnown RBP11.08□□□□□ -0.64
CDH1-204ENST00000562118 TCF7L1Q9HCS4 588 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 STUB1Q9UNE7 303 aa11.08□□□□□ -0.64
CDH1-204ENST00000562118 CDRT1O95170 752 aa11.07□□□□□ -0.64
CDH1-204ENST00000562118 OR2H2O95918 312 aa11.07□□□□□ -0.64
CDH1-204ENST00000562118 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
CDH1-204ENST00000562118 ERP29P30040 261 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms