RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 FFAR1O14842 300 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 HLA-AP01891 365 aaKnown RBP1.65□□□□□ -2.15
USP8-218ENST00000561330 HOXB8P17481 243 aaPredicted RBP1.65□□□□□ -2.15
USP8-218ENST00000561330 TAC1P20366 129 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 DAOAP59103 153 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 RPL31P62899 125 aaKnown RBP1.65□□□□□ -2.15
USP8-218ENST00000561330 HIKESHIQ53FT3 197 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 UBE2NLQ5JXB2 153 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 SYT6Q5T7P8 510 aaPredicted RBP1.65□□□□□ -2.15
USP8-218ENST00000561330 ZNF322Q6U7Q0 402 aaPredicted RBP1.65□□□□□ -2.15
USP8-218ENST00000561330 UGT2A3Q6UWM9 527 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 TMCO2Q7Z6W1 182 aaPredicted RBP1.65□□□□□ -2.15
USP8-218ENST00000561330 OR5T3Q8NGG3 340 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 C22orf15Q8WYQ4 148 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.65□□□□□ -2.15
USP8-218ENST00000561330 UBE2WQ96B02 151 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 PYURFQ96I23 114 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 QKIQ96PU8 341 aaKnown RBP eCLIP1.65□□□□□ -2.15
USP8-218ENST00000561330 ANP32EQ9BTT0 268 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 IL22Q9GZX6 179 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 KIR3DX1Q9H7L2 352 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 LZTFL1Q9NQ48 299 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 SDHAF3Q9NRP4 125 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 FADS3Q9Y5Q0 445 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 BAHCC1Q9P281 2608 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 C2orf16Q68DN1 1984 aa1.65□□□□□ -2.15
USP8-218ENST00000561330 COL5A3P25940 1745 aaPredicted RBP1.64□□□□□ -2.15
USP8-218ENST00000561330 OR2AT4A6NND4 320 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 M0R1B8 84 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 STAG3L3P0CL85 134 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 RALBP11234 206 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 GZMHP20718 246 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 TUBG1P23258 451 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 CCL23P55773 120 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 PSMC5P62195 406 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 BCL2A1Q16548 175 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 CLEC12AQ5QGZ9 265 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 Q6ZS52 159 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 NELFCDQ8IXH7 590 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 OR8K1Q8NGG5 319 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 OR52K2Q8NGK3 314 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 SLC38A1Q9H2H9 487 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 TUBG2Q9NRH3 451 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 DDIT4Q9NX09 232 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 FLVCR2Q9UPI3 526 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 U3KQK5 164 aa1.64□□□□□ -2.15
USP8-218ENST00000561330 DYSFO75923 2080 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 GATCO43716 136 aaKnown RBP1.63□□□□□ -2.15
USP8-218ENST00000561330 PLEKHA8P1O95397 391 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 RLN2P04090 185 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 GTF2F2P13984 249 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 DEFB103AP81534 67 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 IFFO1Q0D2I5 559 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 CST6Q15828 149 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 DUPD1Q68J44 220 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 DPPA2Q7Z7J5 298 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 MSRB3Q8IXL7 192 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 HS3ST5Q8IZT8 346 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 OR8B2Q96RD0 313 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 SHCBP1LQ9BZQ2 653 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 C12orf4Q9NQ89 552 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 PEF1Q9UBV8 284 aaKnown RBP1.63□□□□□ -2.15
USP8-218ENST00000561330 SORL1Q92673 2214 aa1.63□□□□□ -2.15
USP8-218ENST00000561330 SETD1AO15047 1707 aaKnown RBP1.63□□□□□ -2.15
USP8-218ENST00000561330 A6NED7 52 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 CD300LBA8K4G0 201 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 SEC14L6B5MCN3 397 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 UPK2O00526 184 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 GYG2O15488 501 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 OPN1SWP03999 348 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 SCGB1C2P0DMR2 95 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 BCAP31P51572 246 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 SPAG1Q07617 926 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 GPR176Q14439 515 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 FBXO36Q8NEA4 188 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 OR10D4PQ8NGN7 298 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 OR4K13Q8NH42 304 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 SCGB1C1Q8TD33 95 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 PEX13Q92968 403 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 RGCCQ9H4X1 137 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 WDR55Q9H6Y2 383 aaPredicted RBP1.62□□□□□ -2.15
USP8-218ENST00000561330 TUBA4BQ9H853 241 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 ANXA10Q9UJ72 324 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 AP3M1Q9Y2T2 418 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 WDR19Q8NEZ3 1342 aa1.62□□□□□ -2.15
USP8-218ENST00000561330 IGKV1D-37A0A075B6S9 117 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 TRGV4A0A0C4DH28 118 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 SLC5A10A0PJK1 596 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 NCF1BA6NI72 391 aaPredicted RBP1.61□□□□□ -2.15
USP8-218ENST00000561330 NCF1CA8MVU1 366 aaPredicted RBP1.61□□□□□ -2.15
USP8-218ENST00000561330 ALOX12BO75342 701 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 ETHE1O95571 254 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 CGB3P0DN86 165 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 CGB7P0DN87 165 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 CTLA4P16410 223 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 ZNF22P17026 224 aaPredicted RBP1.61□□□□□ -2.15
USP8-218ENST00000561330 MSR1P21757 451 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 CCT6AP40227 531 aaKnown RBP1.61□□□□□ -2.15
USP8-218ENST00000561330 TNXAQ16473 311 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms