RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 V9GY05 133 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 MYO10Q9HD67 2058 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 CKAP5Q14008 2032 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 COL4A6Q14031 1691 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 TNRC18O15417 2968 aaPredicted RBP5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 A0A1B0GUS0 222 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF727A8MUV8 499 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 SNAI2O43623 268 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 PGA3P0DJD8 388 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 HMGA1P17096 107 aaKnown RBP5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 FCARP24071 287 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 ZBTB25P24278 435 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 CHATP28329 748 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 IL12BP29460 328 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 BTG2P78543 158 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF85Q03923 595 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 EXOSC7Q15024 291 aaKnown RBP5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 SHBQ15464 509 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 ABHD17BQ5VST6 288 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 LYPLAL1Q5VWZ2 237 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF343Q6P1L6 599 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 SLC35E3Q7Z769 313 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 LYG2Q86SG7 212 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 C11orf42Q8N5U0 333 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 LRRC75AQ8NAA5 344 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 PLPP5Q8NEB5 264 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 OR2T33Q8NG76 320 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 TMEM170AQ8WVE7 144 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 SMPDL3AQ92484 453 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 NEIL2Q969S2 332 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 GNRHR2Q96P88 292 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 AQP10Q96PS8 301 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 PHB2Q99623 299 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 NMES1Q9C002 83 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 EIF5A2Q9GZV4 153 aaKnown RBP5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 NOX4Q9NPH5 578 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 IL26Q9NPH9 171 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 PLA2G2EQ9NZK7 142 aa5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF223Q9UK11 482 aaPredicted RBP5.85□□□□□ -1.47
TSPAN3-209ENST00000560715 OBSL1O75147 1896 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 UNC119BA6NIH7 251 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 DHRS7CA6NNS2 312 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 EEF1E1-BLOC1S5C9J1V9 151 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 TAAR5O14804 337 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 MLNRO43193 412 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 NME2P1O60361 137 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 RAMP1O60894 148 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 VAMP5O95183 116 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 SLC25A14O95258 325 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 CDK5R1Q15078 307 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 ATP6V1FQ16864 119 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 RSPO4Q2I0M5 234 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 RHBDD2Q6NTF9 364 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 FAHD2BQ6P2I3 314 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF474Q6S9Z5 364 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 ASCL4Q6XD76 172 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.84□□□□□ -1.477e-8■■■■□ 25.3
TSPAN3-209ENST00000560715 ASCL5Q7RTU5 278 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 NUFIP2Q7Z417 695 aaKnown RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 DEFB128Q7Z7B8 93 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 FAM58AQ8N1B3 248 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 GABRG1Q8N1C3 465 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF433Q8N7K0 673 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 OR8S1Q8NH09 359 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 OR5K2Q8NHB8 316 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 RAB39BQ96DA2 213 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 CMBLQ96DG6 245 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 FAHD2AQ96GK7 314 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 BOD1Q96IK1 185 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 JSRP1Q96MG2 331 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 CMKLR1Q99788 373 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 NKX3-1Q99801 234 aaPredicted RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 GPR174Q9BXC1 333 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 CSTL1Q9H114 145 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 IL17CQ9P0M4 197 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 INSL6Q9Y581 213 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 PUS1Q9Y606 427 aaKnown RBP eCLIP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 COLEC10Q9Y6Z7 277 aa5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF106Q9H2Y7 1883 aaKnown RBP5.84□□□□□ -1.47
TSPAN3-209ENST00000560715 DENND4CQ5VZ89 1909 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 MSGN1A6NI15 193 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 H0YIZ8 118 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 RRHO14718 337 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 PIN1P1O15428 100 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 CCL25O15444 150 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF354AO60765 605 aaPredicted RBP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 GJB5O95377 273 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 CYB5R3P00387 301 aaPredicted RBP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 DCNP07585 359 aaKnown RBP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 CCL5P13501 91 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF7P17097 686 aaPredicted RBP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 BCKDHBP21953 392 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 UQCRFS1P47985 274 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 MIDNQ504T8 468 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF705AQ6ZN79 300 aaPredicted RBP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 DND1Q8IYX4 353 aaKnown RBP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 SPEM1Q8N4L4 309 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 POC1AQ8NBT0 407 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF689Q96CS4 500 aaPredicted RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms