RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 BBS1Q8NFJ9 593 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 OR5AU1Q8NGC0 362 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 OR8S1Q8NH09 359 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 SPSB4Q96A44 273 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 NMNAT3Q96T66 252 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 CENPOQ9BU64 300 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 IFT27Q9BW83 186 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 NDEL1Q9GZM8 345 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 FGF23Q9GZV9 251 aaPredicted RBP7.96□□□□□ -1.14
TPM1-225ENST00000560679 OPA3Q9H6K4 179 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.14
TPM1-225ENST00000560679 CMC2Q9NRP2 79 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 H2AFY2Q9P0M6 372 aaPredicted RBP7.96□□□□□ -1.14
TPM1-225ENST00000560679 STUB1Q9UNE7 303 aa7.96□□□□□ -1.14
TPM1-225ENST00000560679 APOL3O95236 402 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 IFNGP01579 166 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 ACAA1P09110 424 aaPredicted RBP7.95□□□□□ -1.14
TPM1-225ENST00000560679 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
TPM1-225ENST00000560679 LIMS3P0CW19 117 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 LIMS4P0CW20 117 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 CPEP16870 476 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 COX7A1P24310 79 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 ERVFRD-1P60508 538 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 TPBGQ13641 420 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 KLHL12Q53G59 568 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 LYPD4Q6UWN0 246 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 DRAM2Q6UX65 266 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 DPY19L2P2Q6ZN68 376 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 Q6ZNX1 250 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 MEPCEQ7L2J0 689 aaKnown RBP7.95□□□□□ -1.14
TPM1-225ENST00000560679 FAM185AQ8N0U4 392 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 OR2AJ1Q8NGZ0 328 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 OR52N1Q8NH53 320 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 SPTSSAQ969W0 71 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 PRSS22Q9GZN4 317 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 EXOSC4Q9NPD3 245 aaKnown RBP7.95□□□□□ -1.14
TPM1-225ENST00000560679 RPRD1BQ9NQG5 326 aaKnown RBP7.95□□□□□ -1.14
TPM1-225ENST00000560679 ZNF222Q9UK12 451 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 SSR3Q9UNL2 185 aa7.95□□□□□ -1.14
TPM1-225ENST00000560679 A0A075B6Q4 140 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 IGKV1D-17A0A075B6S4 117 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 TRBV23-1A0A0A0MS06 115 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 hCG_38984A0A1B0GV85 526 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 OR6C68A6NDL8 312 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 CCDC182A6NF36 153 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 ANKRD30BLA7E2S9 258 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 PRR23D1E9PI22 279 aaPredicted RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 ZNF670-ZNF695F2Z2N8 137 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 AKR7A2O43488 359 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 PEX14O75381 377 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 CHRM2P08172 466 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 PRR23D2P0DMB1 279 aaPredicted RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 HIST1H1CP16403 213 aaKnown RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 PSMA1P25786 263 aaKnown RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 SOX6P35712 828 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 NAA10P41227 235 aaPredicted RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 PRKXP51817 358 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 FAM3AP98173 230 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 LIPKQ5VXJ0 399 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 PLBD1Q6P4A8 553 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 C10orf99Q6UWK7 81 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 SHFQ7M4L6 423 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 SLC16A9Q7RTY1 509 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 ZNF485Q8NCK3 441 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 ZNRF1Q8ND25 227 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 OR4K13Q8NH42 304 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 UFD1Q92890 307 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 MED30Q96HR3 178 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 ERMAPQ96PL5 475 aaPredicted RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 RNF167Q9H6Y7 350 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 TSSC4Q9Y5U2 329 aaPredicted RBP7.94□□□□□ -1.14
TPM1-225ENST00000560679 PEX16Q9Y5Y5 336 aa7.94□□□□□ -1.14
TPM1-225ENST00000560679 LCE6AA0A183 80 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 TCRBV4S1A1TA0A5B7 111 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 FAM183AA6NL82 134 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 OR2AT4A6NND4 320 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ODF3BA8MYP8 253 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 J3QRE1 110 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 XRCC2O43543 280 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 HLA-DQA2P01906 255 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ZNF3P17036 446 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 PAICSP22234 425 aaKnown RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 NOS3P29474 1203 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 DCTDP32321 178 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ATP6V1E1P36543 226 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 DDOSTP39656 456 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 RPS25P62851 125 aaKnown RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 RGS21Q2M5E4 152 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ARSJQ5FYB0 599 aaPredicted RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 SLC35F1Q5T1Q4 408 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 OR2G6Q5TZ20 316 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ZNF782Q6ZMW2 699 aaPredicted RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 MRPL41Q8IXM3 137 aaKnown RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 CYB561A3Q8NBI2 242 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 SLC37A3Q8NCC5 494 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 SDR9C7Q8NEX9 313 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 TMEM185AQ8NFB2 350 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 OR10Z1Q8NGY1 313 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 MUC7Q8TAX7 377 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 RPS4Y2Q8TD47 263 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms