RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 GRK1Q15835 563 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 FAM27D1Q5T7N8 215 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 ASPHD1Q5U4P2 390 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 TMEM42Q69YG0 159 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 HEPN1Q6WQI6 88 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 RASSF6Q6ZTQ3 369 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 ASRGL1Q7L266 308 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 FOXRED2Q8IWF2 684 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 OR9Q2Q8NGE9 314 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 RP9Q8TA86 221 aaKnown RBP6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 OR51E1Q8TCB6 317 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 ITFG2Q969R8 447 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 TEAD3Q99594 435 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 KCTD14Q9BQ13 255 aaPredicted RBP6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 PKIBQ9C010 78 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 CCDC134Q9H6E4 229 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 GPR84Q9NQS5 396 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 FAM206AQ9NX38 181 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 DNAJB9Q9UBS3 223 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 ENPP5Q9UJA9 477 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 SAMD4AQ9UPU9 718 aaKnown RBP6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 UBE2J1Q9Y385 318 aaPredicted RBP6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 SIRT4Q9Y6E7 314 aaPredicted RBP6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 V9GYQ6 96 aa6.97□□□□□ -1.29
RABGGTA-217ENST00000560521 A6NIN4 97 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 ACOD1A6NK06 481 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 OOSP1A8MZH6 123 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 TOR1AO14656 332 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 LDLRAD4O15165 306 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 INMTO95050 263 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 ELANEP08246 267 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 GP9P14770 177 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 TMEM11P17152 192 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 MYF6P23409 242 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 ERP29P30040 261 aaKnown RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 SF3A3Q12874 501 aaKnown RBP eCLIP6.96□□□□□ -1.36e-11■■□□□ 13
RABGGTA-217ENST00000560521 IL24Q13007 206 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 FOXE3Q13461 319 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 GPR50Q13585 617 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 DIAPH2-AS1Q14236 149 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 HNF4GQ14541 408 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 CXorf66Q5JRM2 361 aaPredicted RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 CLVS2Q5SYC1 327 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 LCN1P1Q5VSP4 162 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 CCDC144NLQ6NUI1 221 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 LHFPL2Q6ZUX7 228 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 TRAPPC6BQ86SZ2 158 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF429Q86V71 674 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 RNF148Q8N7C7 305 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF454Q8N9F8 522 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 OR56B4Q8NH76 319 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 TRMT10AQ8TBZ6 339 aaKnown RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 C4orf3Q8WVX3 66 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 CREB3L1Q96BA8 519 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 RBMXL1Q96E39 390 aaKnown RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 PYURFQ96I23 114 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 HOPXQ9BPY8 73 aaPredicted RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 PBOV1Q9GZY1 135 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 SEBOXQ9HB31 216 aaPredicted RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 MRGBPQ9NV56 204 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 INTS9Q9NV88 658 aaKnown RBP6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 ARMC1Q9NVT9 282 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 IL36RNQ9UBH0 155 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 BAIAP2Q9UQB8 552 aa6.96□□□□□ -1.3
RABGGTA-217ENST00000560521 IGKV1-27A0A075B6S5 117 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 A0A087X0M5 115 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 TMEM269A0A1B0GVZ9 245 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 A0A1B0GX30 115 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 A0A1W2PPI3 338 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 PRR23D1E9PI22 279 aaPredicted RBP6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 AP4M1O00189 453 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 DLGAP1O14490 977 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 DHRS3O75911 302 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 HAND1O96004 215 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 IFNGP01579 166 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 PRR23D2P0DMB1 279 aaPredicted RBP6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF3P17036 446 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 GABRR1P24046 479 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 HMGA2P52926 109 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 HCCSP53701 268 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 PRRX1P54821 245 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 ZNF91Q05481 1191 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 HES1Q14469 280 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 RBM39Q14498 530 aaKnown RBP6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 SAMD4BQ5PRF9 694 aaKnown RBP6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 COMMD2Q86X83 199 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 OR2T33Q8NG76 320 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 CORO2AQ92828 525 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 SLAMF9Q96A28 289 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 CEP19Q96LK0 163 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 CADM1Q9BY67 442 aaKnown RBP6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 OR51V1Q9H2C8 321 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 CMC2Q9NRP2 79 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 ABCD2Q9UBJ2 740 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 U3KQV3 271 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 MUC4Q99102 2169 aa6.95□□□□□ -1.3
RABGGTA-217ENST00000560521 RIIAD1A6NNX1 92 aa6.94□□□□□ -1.3
RABGGTA-217ENST00000560521 I3L521 148 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms