RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SEBOXQ9HB31 216 aaPredicted RBP11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 TMEM138Q9NPI0 162 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 ABCB10Q9NRK6 738 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 HIF1ANQ9NWT6 349 aa11.68□□□□□ -0.54
PKNOX1-209ENST00000560448 NOTOA8MTQ0 251 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 H3BSH0 61 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 AKR7A2O43488 359 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 RHBDL1O75783 438 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 ECDO95905 644 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 LIPFP07098 398 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 EGR1P18146 543 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 CD80P33681 288 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 PITPNBP48739 271 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 STEAP3Q658P3 488 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 METAP1DQ6UB28 335 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 CALHM1Q8IU99 346 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 BOLLQ8N9W6 283 aaKnown RBP11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 ZSCAN4Q8NAM6 433 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 OR13C9Q8NGT0 318 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 ORAI1Q96D31 301 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 DIRAS2Q96HU8 199 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 METTL17Q9H7H0 456 aaPredicted RBP11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 FOXJ3Q9UPW0 622 aa11.67□□□□□ -0.54
PKNOX1-209ENST00000560448 FABP12A6NFH5 140 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 OR2AT4A6NND4 320 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 TMPRSS2O15393 492 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 ADAM20O43506 726 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF205O95201 554 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 KNG1P01042 644 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 HCKP08631 526 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 SLC2A2P11168 524 aaPredicted RBP11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 RIPPLY3P57055 190 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 ERVK11-1P61568 191 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 SCGB2A2Q13296 93 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 CNIH2Q6PI25 160 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 ACP7Q6ZNF0 438 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 CDH26Q8IXH8 852 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 MINDY2Q8NBR6 621 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 ANGPTL6Q8NI99 470 aa11.66□□□□□ -0.54
PKNOX1-209ENST00000560448 IGKV1-27A0A075B6S5 117 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 PDCD5O14737 125 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 NXPH2O95156 264 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 GYPAP02724 150 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 ELK1P19419 428 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 SOX2P48431 317 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 IL13RA1P78552 427 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 KISS1Q15726 138 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 LRRC10Q5BKY1 277 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 SPIN3Q5JUX0 258 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 DCAF12L2Q5VW00 463 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 WDR25Q64LD2 544 aaPredicted RBP11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 FAM131AQ6UXB0 335 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 BTNL3Q6UXE8 466 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF788Q6ZQV5 615 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 SLC25A26Q70HW3 274 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 LRRTM1Q86UE6 522 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 ZNF561Q8N587 486 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 NKAIN3Q8N8D7 197 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 PNLDC1Q8NA58 520 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 PXT1Q8NFP0 134 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 NPRL2Q8WTW4 380 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 SHARPINQ9H0F6 387 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 ABRACLQ9P1F3 81 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 DAPK2Q9UIK4 370 aa11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 AK6Q9Y3D8 172 aaKnown RBP11.65□□□□□ -0.54
PKNOX1-209ENST00000560448 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 MEGF11A6BM72 1044 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 NDUFB3O43676 98 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 SYNGR1O43759 233 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 TMEM127O75204 238 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 CRLF1O75462 422 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 IGFBP3P17936 291 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 ADRA2CP18825 462 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 BDKRB2P30411 391 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 RANBP1P43487 201 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 LCN2P80188 198 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 BAK1Q16611 211 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 CHRFAM7AQ494W8 412 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 DMRTC1Q5HYR2 192 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 ANGPTL5Q86XS5 388 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 GDPD1Q8N9F7 314 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 SDSLQ96GA7 329 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 WDR13Q9H1Z4 485 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 PCDHB16Q9NRJ7 776 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 TAS2R4Q9NYW5 299 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 GLS2Q9UI32 602 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 ADAM30Q9UKF2 790 aa11.64□□□□□ -0.55
PKNOX1-209ENST00000560448 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms