RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 OR13C3Q8NGS6 347 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 EME1Q96AY2 570 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 SPSB1Q96BD6 273 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 FGGYQ96C11 551 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 RNFT2Q96EX2 444 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 CPNE2Q96FN4 548 aaPredicted RBP10.2□□□□□ -0.78
SNX1-209ENST00000559961 Q96MT0 163 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 GAL3ST2Q9H3Q3 398 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 SEBOXQ9HB31 216 aaPredicted RBP10.2□□□□□ -0.78
SNX1-209ENST00000559961 EXOSC4Q9NPD3 245 aaKnown RBP10.2□□□□□ -0.78
SNX1-209ENST00000559961 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.2□□□□□ -0.78
SNX1-209ENST00000559961 HHLA2Q9UM44 414 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 SIGLEC9Q9Y336 463 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 LINC00312Q9Y6C7 94 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 SESN1Q9Y6P5 492 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 MINOS1-NBL1R4GNA1 71 aa10.2□□□□□ -0.78
SNX1-209ENST00000559961 J3QLW9 94 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 TOR1AO14656 332 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 XPNPEP2O43895 674 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 FBXO24O75426 580 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 ZNF19P17023 458 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 ATF1P18846 271 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 AZGP1P25311 298 aaKnown RBP10.19□□□□□ -0.78
SNX1-209ENST00000559961 UTS2BQ765I0 119 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 LHFPL4Q7Z7J7 247 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 ACBD7Q8N6N7 88 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 OR4F17Q8NGA8 305 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 OR2G2Q8NGZ5 317 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 CREB3L1Q96BA8 519 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 OPALINQ96PE5 141 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 OR4F4Q96R69 305 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 CLEC7AQ9BXN2 247 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 RHOFQ9HBH0 211 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 FOXJ3Q9UPW0 622 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 TCF19Q9Y242 345 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 UBE2J1Q9Y385 318 aaPredicted RBP10.19□□□□□ -0.78
SNX1-209ENST00000559961 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
SNX1-209ENST00000559961 A0A0G2JK05 382 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 TRBV2A0A0J9YWF9 115 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 FAM90A8PA6NJQ4 464 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 SLC16A6O15403 523 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 MAGEB3O15480 346 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 MPZL2O60487 215 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 ZNF737O75373 536 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 OPN1MWP04001 364 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 OPN1MW2P0DN77 364 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 OPN1MW3P0DN78 364 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 BCL3P20749 454 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 HTR1DP28221 377 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 POLR2IP36954 125 aaKnown RBP10.18□□□□□ -0.78
SNX1-209ENST00000559961 CEACAM3P40198 252 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 RAB13P51153 203 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 CCR9P51686 369 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 SNU13P55769 128 aaKnown RBP10.18□□□□□ -0.78
SNX1-209ENST00000559961 SCN1BQ07699 218 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 MRPL28Q13084 256 aaKnown RBP10.18□□□□□ -0.78
SNX1-209ENST00000559961 NSUN5P1Q3KNT7 163 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 ZNF626Q68DY1 528 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 ZFP1Q6P2D0 407 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 RTN4RL2Q86UN3 420 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 C1QL4Q86Z23 238 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 RDH10Q8IZV5 341 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 PRSS35Q8N3Z0 413 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 C11orf42Q8N5U0 333 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 OR4D6Q8NGJ1 314 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 OR5D14Q8NGL3 314 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 ZNF596Q8TC21 504 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 AJUBAQ96IF1 538 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 CHST6Q9GZX3 395 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 COMMD4Q9H0A8 199 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 TMEM133Q9H2Q1 129 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 GSTK1Q9Y2Q3 226 aa10.18□□□□□ -0.78
SNX1-209ENST00000559961 MEX3AA1L020 520 aaKnown RBP10.17□□□□□ -0.78
SNX1-209ENST00000559961 SIRPB1O00241 398 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 ENTPD6O75354 484 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 FADS2O95864 444 aaKnown RBP10.17□□□□□ -0.78
SNX1-209ENST00000559961 ISG15P05161 165 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 HCKP08631 526 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 ZNF44P15621 663 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 PAX6P26367 422 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 DUSP1P28562 367 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 ERP29P30040 261 aaKnown RBP10.17□□□□□ -0.78
SNX1-209ENST00000559961 VDAC2P45880 294 aaPredicted RBP10.17□□□□□ -0.78
SNX1-209ENST00000559961 DYNLT3P51808 116 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 PRRX1P54821 245 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 DLX6P56179 175 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 P2RX3P56373 397 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 SNRPGP62308 76 aaKnown RBP10.17□□□□□ -0.78
SNX1-209ENST00000559961 ZNF91Q05481 1191 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 PDZK1IP1Q13113 114 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 ZNF146Q15072 292 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 TMEM219Q86XT9 240 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 RBFOX1Q9NWB1 397 aaKnown RBP10.17□□□□□ -0.78
SNX1-209ENST00000559961 GMPPBQ9Y5P6 360 aa10.17□□□□□ -0.78
SNX1-209ENST00000559961 IGKV1-27A0A075B6S5 117 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 TMEM82A0PJX8 343 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 MEGF11A6BM72 1044 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 A6NDX4 124 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 ODF3BA8MYP8 253 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms