RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 LINC00696Q6ZRV3 163 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 MKXQ8IYA7 352 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 ZDHHC23Q8IYP9 409 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 FAM185AQ8N0U4 392 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 FBXL14Q8N1E6 418 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF611Q8N823 705 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 LRTM2Q8N967 370 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 CCDC71LQ8N9Z2 235 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 OR56B2PQ8NGI1 322 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 OR5A2Q8NGI9 324 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 FNDC9Q8TBE3 224 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 MAFIPQ8WZ33 124 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 SLC39A7Q92504 469 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 POM121L2Q96KW2 1035 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 WDR13Q9H1Z4 485 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 PLK3Q9H4B4 646 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 CALHM2Q9HA72 323 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 RHOFQ9HBH0 211 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 C12orf4Q9NQ89 552 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 PLSCR2Q9NRY7 297 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 ZFP57Q9NU63 452 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 PLA2G3Q9NZ20 509 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 IL17BQ9UHF5 180 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 TUBD1Q9UJT1 453 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 KCNIP3Q9Y2W7 256 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 MPC1Q9Y5U8 109 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 DNAJC13O75165 2243 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 ZNF407Q9C0G0 2248 aa6.98□□□□□ -1.29
SMAD3-212ENST00000559937 PCNX2A6NKB5 2137 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 MED12LQ86YW9 2145 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 AHCTF1Q8WYP5 2266 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RAB19A4D1S5 217 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 OR5B21A6NL26 309 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 H0YIZ8 118 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 GEMIN2O14893 280 aaKnown RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 ADAP1O75689 374 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 APLNRP35414 380 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RFC3P40938 356 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 FGF12P61328 243 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 SRPXP78539 464 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 PRDX4Q13162 271 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RBM39Q14498 530 aaKnown RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 SMCO1Q147U7 214 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 ATXN7L3Q14CW9 347 aaPredicted RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RSPO4Q2I0M5 234 aaPredicted RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 PIGYQ3MUY2 71 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 SLC22A25Q6T423 547 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 PIP4P1Q86T03 277 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 BAP18Q8IXM2 172 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 SLC38A6Q8IZM9 456 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 IL22RA1Q8N6P7 574 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 OR5L1Q8NGL2 311 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 OR1K1Q8NGR3 316 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 GTF3AQ92664 365 aaKnown RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 MOB3AQ96BX8 217 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 CNTNAP3BQ96NU0 1288 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 SYT3Q9BQG1 590 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 HDHD3Q9BSH5 251 aaPredicted RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 CNTNAP3Q9BZ76 1288 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 PIGMQ9H3S5 423 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RIMS4Q9H426 269 aaPredicted RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 NARFLQ9H6Q4 476 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 NAA60Q9H7X0 242 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 ZDHHC11Q9H8X9 412 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 GLRX2Q9NS18 164 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 TMEM100Q9NV29 134 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 RCC2Q9P258 522 aaKnown RBP6.97□□□□□ -1.29
SMAD3-212ENST00000559937 STARD10Q9Y365 291 aa6.97□□□□□ -1.29
SMAD3-212ENST00000559937 MAP1BP46821 2468 aaKnown RBP6.96□□□□□ -1.29
SMAD3-212ENST00000559937 TRBV6-6A0A0A6YYG2 114 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 TRGV5A0A0B4J1U4 118 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 C5orf49A4QMS7 147 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 TRAPPC2LH3BP13 241 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 TEX46H3BTG2 121 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 LRP3O75074 770 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 PLATP00750 562 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 KNG1P01042 644 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 IGHV3-9P01782 118 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 HLA-HP01893 362 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 SFTPBP07988 381 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 CTXN2P0C2S0 81 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 CD79AP11912 226 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 PI3P19957 117 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 HERV-K104P61576 105 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 RND3P61587 244 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 RAB1AP62820 205 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 RAB32Q13637 225 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 IL13RA2Q14627 380 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM187Q14656 261 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 ESPL1Q14674 2120 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 IAH1Q2TAA2 248 aaPredicted RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 ABCA11PQ4W5N1 156 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF766Q5HY98 468 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 FAM209AQ5JX71 171 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 FBXW9Q5XUX1 488 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 EIF5AL1Q6IS14 154 aaKnown RBP6.96□□□□□ -1.3
SMAD3-212ENST00000559937 TFAP2EQ6VUC0 442 aa6.96□□□□□ -1.3
SMAD3-212ENST00000559937 LIAT1Q6ZQX7 453 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms