RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 PARP16Q8N5Y8 322 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 ZNF485Q8NCK3 441 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 OR52N4Q8NGI2 321 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 OR52N1Q8NH53 320 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 TNFRSF14Q92956 283 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 GSTK1Q9Y2Q3 226 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 K7N7A8 449 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 CHRM2P08172 466 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 MELTFP08582 738 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 TMEM225BP0DP42 221 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 RAB3AP20336 220 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 EDDM3BP56851 147 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 ZP1P60852 638 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 MED21Q13503 144 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 KISS1Q15726 138 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 CCDC58Q4VC31 144 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 DMKNQ6E0U4 476 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 HCP5Q6MZN7 132 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 C12orf54Q6X4T0 127 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 TPRX1Q8N7U7 411 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 HAVCR2Q8TDQ0 301 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 GHSRQ92847 366 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 GCDHQ92947 438 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 SMIM19Q96E16 107 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 HMG20AQ9NP66 347 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 PLCXD1Q9NUJ7 323 aa12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 CNOT2Q9NZN8 540 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-211ENST00000559850 A0A1W2PPK0 400 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 PTGES3LE9PB15 166 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 M0R1W7 72 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 GABRPO00591 440 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 MYL12BO14950 172 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 NPFFO15130 113 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 PSPNO60542 156 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 KDM4BO94953 1096 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 GABRR1P24046 479 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 PAX6P26367 422 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 SCN1BQ07699 218 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 Q6YL49 198 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 C17orf107Q6ZR85 190 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 GDPD3Q7L5L3 318 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 Q8IYB0 196 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 OR4S1Q8NGB4 309 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 OR10K1Q8NGX5 313 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 FAM234AQ9H0X4 552 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 FKBP14Q9NWM8 211 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 PAK1IP1Q9NWT1 392 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 ZNF281Q9Y2X9 895 aa12.14□□□□□ -0.47
RABGGTA-211ENST00000559850 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 MAGEA13PA6NCF6 341 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 H0YHG0 523 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 RNASE1P07998 156 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 COX7A1P24310 79 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 OR3A4PP47883 348 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 BPIFB3P59826 476 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 BLMHQ13867 455 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 GRK1Q15835 563 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 C6orf141Q5SZD1 244 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 ZNF782Q6ZMW2 699 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 TCF23Q7RTU1 214 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 OR8H2Q8N162 312 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 C11orf42Q8N5U0 333 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 SLC25A28Q96A46 364 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 SNX22Q96L94 193 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 GPER1Q99527 375 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 CHIAQ9BZP6 476 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 FAM192AQ9GZU8 254 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 METTL8Q9H825 291 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
RABGGTA-211ENST00000559850 TRAV8-7A0A075B6U6 113 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 MEIOCA2RUB1 952 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 ALX3O95076 343 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 OR2H2O95918 312 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 IGHV4-59P01825 116 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 CDK1P06493 297 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 CD2P06729 351 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 OMGP23515 440 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 EEF1B2P24534 225 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 SAA4P35542 130 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 OR3A1P47881 315 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 DLX6P56179 175 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 WNT4P56705 351 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 ZNF146Q15072 292 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 METAP1DQ6UB28 335 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
RABGGTA-211ENST00000559850 NANOGP1Q8N7R0 232 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms