RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ADRA2CP18825 462 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 PSMA1P25786 263 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 DUSP1P28562 367 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 GABRA5P31644 462 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 LRRTM1Q86UE6 522 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 FCGR1BQ92637 280 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 SEBOXQ9HB31 216 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 RHOFQ9HBH0 211 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 ING4Q9UNL4 249 aa16.79■□□□□ 0.28
TSPAN3-207ENST00000559494 RGS9O75916 674 aaPredicted RBP16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 CDRT1O95170 752 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 ECDO95905 644 aaPredicted RBP16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 CHRM2P08172 466 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 SRMP19623 302 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 PSMB9P28065 219 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 SNU13P55769 128 aaKnown RBP16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 CAV3P56539 151 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 COL10A1Q03692 680 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 ZNF146Q15072 292 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 C11orf91Q3C1V1 193 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 CHRFAM7AQ494W8 412 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 HSD17B12Q53GQ0 312 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 CDH26Q8IXH8 852 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 ZNF561Q8N587 486 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 OR10K1Q8NGX5 313 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 FAM192AQ9GZU8 254 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 CNTD2Q9H8S5 307 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 TCF7L1Q9HCS4 588 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 NDUFB11Q9NX14 153 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 LPAR3Q9UBY5 353 aa16.78■□□□□ 0.28
TSPAN3-207ENST00000559494 MEGF11A6BM72 1044 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 GPR37O15354 613 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 ENSAO43768 121 aaKnown RBP16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 TNFAIP8O95379 198 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 HAND1O96004 215 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 ELP2Q6IA86 826 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 BTNL3Q6UXE8 466 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 LY6G5BQ8NDX9 201 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 TMEM185AQ8NFB2 350 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 Q8NFD4 153 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 PHYHIPQ92561 330 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 DCTN5Q9BTE1 182 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 ZNF696Q9H7X3 374 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 ELL3Q9HB65 397 aaPredicted RBP16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 RPUSD1Q9UJJ7 312 aaKnown RBP16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 GSTK1Q9Y2Q3 226 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 AUP1Q9Y679 476 aa16.77■□□□□ 0.28
TSPAN3-207ENST00000559494 TMEM82A0PJX8 343 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 CCRL2O00421 344 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 ZNF737O75373 536 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 NDUFB7P17568 137 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 CAPZA1P52907 286 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 RSU1Q15404 277 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 CD200R1LQ6Q8B3 271 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 FIP1L1Q6UN15 594 aaKnown RBP16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 JAGN1Q8N5M9 183 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 PNLDC1Q8NA58 520 aaKnown RBP16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 TSPAN14Q8NG11 270 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 H1FXQ92522 213 aaKnown RBP16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 MUL1Q969V5 352 aa16.76■□□□□ 0.27
TSPAN3-207ENST00000559494 K7N7A8 449 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 HTR3BO95264 441 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 TK1P04183 234 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 LIPFP07098 398 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 CD37P11049 281 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 HNF1AP20823 631 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 MTNR1BP49286 362 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 FGF12P61328 243 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 NEDD8Q15843 81 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 SPIN3Q5JUX0 258 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 SYT6Q5T7P8 510 aaPredicted RBP16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 Q6P435 159 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 OR4D6Q8NGJ1 314 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 C8orf46Q8TAG6 207 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 MRI1Q9BV20 369 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 METTL9Q9H1A3 318 aa16.75■□□□□ 0.27
TSPAN3-207ENST00000559494 A0A087WXM4 84 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 TRDV1A0A1B0GX56 115 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 SH2D1BO14796 132 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 PDCD1Q15116 288 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 C17orf107Q6ZR85 190 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 NKAIN3Q8N8D7 197 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 ASCC1Q8N9N2 400 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 OR51T1Q8NGJ9 327 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 SNX22Q96L94 193 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 NR1H4Q96RI1 486 aaPredicted RBP16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 FAM234AQ9H0X4 552 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 IL36GQ9NZH8 169 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 GLS2Q9UI32 602 aa16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 MRPS28Q9Y2Q9 187 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-207ENST00000559494 PSPNO60542 156 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 ARL6IP5O75915 188 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 OR2H2O95918 312 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 PPIAL4GP0DN37 164 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 LMO1P25800 156 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 SRP14P37108 136 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 BMXP51813 675 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 ARF6P62330 175 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 GLIPR1L1Q6UWM5 242 aa16.73■□□□□ 0.27
TSPAN3-207ENST00000559494 C1orf147Q96MC9 270 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms