RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CAPGP40121 348 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 NPBWR2P48146 333 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 COMPP49747 757 aaPredicted RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 UBE2E1P51965 193 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 SCN1BQ07699 218 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 PDZK1IP1Q13113 114 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 IL18R1Q13478 541 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 ZNF273Q14593 569 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 GRK1Q15835 563 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 OGFRL1Q5TC84 451 aaPredicted RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 RPL22L1Q6P5R6 122 aaKnown RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 ZNF782Q6ZMW2 699 aaPredicted RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 C1orf122Q6ZSJ8 110 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 SATL1Q86VE3 508 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 SERPINA12Q8IW75 414 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 OR8H2Q8N162 312 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 TMEM86BQ8N661 226 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 OR5D14Q8NGL3 314 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 GPR148Q8TDV2 347 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 TMEM80Q96HE8 168 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 GPER1Q99527 375 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 FAM192AQ9GZU8 254 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 DPAGT1Q9H3H5 408 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 PRDM13Q9H4Q3 707 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 HEXA-AS1Q9H8Q6 139 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 EXOSC4Q9NPD3 245 aaKnown RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 MRPS18AQ9NVS2 196 aaKnown RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 DIMT1Q9UNQ2 313 aaKnown RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 SF3B6Q9Y3B4 125 aaKnown RBP6.71□□□□□ -1.34
SNX1-207ENST00000559401 POMT1Q9Y6A1 747 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 PNMA8CA0A1B0GUJ8 204 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 TMEM82A0PJX8 343 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ERICH4A6NGS2 130 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 MYL12BO14950 172 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 GPR137BO60478 399 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ZNF737O75373 536 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 MT-ND2P03891 347 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ZNF44P15621 663 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 RAB3AP20336 220 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 MDKP21741 143 aaPredicted RBP6.7□□□□□ -1.34
SNX1-207ENST00000559401 IER3P46695 156 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 RAG2P55895 527 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 LGALS4P56470 323 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ERVFRD-1P60508 538 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 PPP3R1P63098 170 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ADARB1P78563 741 aaKnown RBP6.7□□□□□ -1.34
SNX1-207ENST00000559401 ACSM1Q08AH1 577 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ST3GAL4Q11206 333 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 CDK5R1Q15078 307 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 SPIN3Q5JUX0 258 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 XAF1Q6GPH4 301 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 AHSA2Q719I0 299 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 RNF144BQ7Z419 303 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 TRAPPC6BQ86SZ2 158 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 LDLRAD3Q86YD5 345 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 STX19Q8N4C7 294 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 TPRX1Q8N7U7 411 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ZFP41Q8N8Y5 198 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 BPIFB6Q8NFQ5 453 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 OR4F5Q8NH21 305 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 DYRK2Q92630 601 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 TNFRSF14Q92956 283 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 CPNE2Q96FN4 548 aaPredicted RBP6.7□□□□□ -1.34
SNX1-207ENST00000559401 SNX22Q96L94 193 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ZNF649Q9BS31 505 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 JAM3Q9BX67 310 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 DCLRE1BQ9H816 532 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 UNKLQ9H9P5 680 aaKnown RBP6.7□□□□□ -1.34
SNX1-207ENST00000559401 ING3Q9NXR8 418 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 TAS2R4Q9NYW5 299 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 ZNRD1Q9P1U0 126 aa6.7□□□□□ -1.34
SNX1-207ENST00000559401 FBN3Q75N90 2809 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 DSCAML1Q8TD84 2053 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 TENM1Q9UKZ4 2725 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 IGKV1-12A0A0C4DH73 117 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 hADV38S2A0JD32 116 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 EFCAB10A6NFE3 127 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 SH2D1BO14796 132 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 MGST3O14880 152 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 CASQ2O14958 399 aaPredicted RBP6.69□□□□□ -1.34
SNX1-207ENST00000559401 XPNPEP2O43895 674 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 KDM4BO94953 1096 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 IGKV1D-12P01611 117 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 GNAO1P09471 354 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 ZNF728P0DKX0 622 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 BMXP51813 675 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 DYNC1I2Q13409 638 aaKnown RBP6.69□□□□□ -1.34
SNX1-207ENST00000559401 KISS1Q15726 138 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 CCDC58Q4VC31 144 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 MIDNQ504T8 468 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 DHRS7BQ6IAN0 325 aaPredicted RBP6.69□□□□□ -1.34
SNX1-207ENST00000559401 C17orf107Q6ZR85 190 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 PARP16Q8N5Y8 322 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 OR4S1Q8NGB4 309 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 OR52N4Q8NGI2 321 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 OR52N1Q8NH53 320 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 TNFAIP8L1Q8WVP5 186 aa6.69□□□□□ -1.34
SNX1-207ENST00000559401 RGP1Q92546 391 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms