RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SIRPB1O00241 398 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 EI24O14681 340 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ALPLP05186 524 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ATF1P18846 271 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 CD24P25063 80 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 AZGP1P25311 298 aaKnown RBP10.89□□□□□ -0.67
VPS18-203ENST00000558855 LGALS4P56470 323 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ACTA2P62736 377 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 BLCAPP62952 87 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ACTG2P63267 376 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ACTC1P68032 377 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ACTA1P68133 377 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 GRK1Q15835 563 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 GDPD3Q7L5L3 318 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 OR5D18Q8NGL1 313 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 OR2T6Q8NHC8 308 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 FGGYQ96C11 551 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 PELI1Q96FA3 418 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 BORCS8Q96FH0 119 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 SNX22Q96L94 193 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 ZNF714Q96N38 554 aa10.89□□□□□ -0.67
VPS18-203ENST00000558855 IGHV2-26A0A0B4J1V2 119 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 TRBV2A0A0J9YWF9 115 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 A0A1W2PPH5 198 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 GATBO75879 557 aaKnown RBP10.88□□□□□ -0.67
VPS18-203ENST00000558855 OPN1MWP04001 364 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 UBCP0CG48 685 aaKnown RBP10.88□□□□□ -0.67
VPS18-203ENST00000558855 OPN1MW2P0DN77 364 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 OPN1MW3P0DN78 364 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 PRKACAP17612 351 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 GABRB1P18505 474 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 GABRR1P24046 479 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 DYNC1I2Q13409 638 aaKnown RBP10.88□□□□□ -0.67
VPS18-203ENST00000558855 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 FDX2Q6P4F2 183 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 Q6ZTK2 550 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 FAM58AQ8N1B3 248 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 OR4P4Q8NGL7 312 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 RNFT2Q96EX2 444 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 HRASLS5Q96KN8 279 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 ZNF649Q9BS31 505 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 NPFFR1Q9GZQ6 430 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 WNT10AQ9GZT5 417 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 MMP28Q9H239 520 aa10.88□□□□□ -0.67
VPS18-203ENST00000558855 ISG20L2Q9H9L3 353 aaKnown RBP10.88□□□□□ -0.67
VPS18-203ENST00000558855 TBL2Q9Y4P3 447 aaKnown RBP10.88□□□□□ -0.67
VPS18-203ENST00000558855 DNAH9Q9NYC9 4486 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 SH2D7A6NKC9 451 aaPredicted RBP10.87□□□□□ -0.67
VPS18-203ENST00000558855 OR4C45A6NMZ5 311 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 E9PI62 339 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 RBP4P02753 201 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 FCGR1AP12314 374 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 GLIPR1P48060 266 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 RBP2P50120 134 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 KPNB1Q14974 876 aaKnown RBP10.87□□□□□ -0.67
VPS18-203ENST00000558855 ZNF146Q15072 292 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 CNN3Q15417 329 aaKnown RBP10.87□□□□□ -0.67
VPS18-203ENST00000558855 KPRPQ5T749 579 aaPredicted RBP10.87□□□□□ -0.67
VPS18-203ENST00000558855 ZNF676Q8N7Q3 588 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 DNAAF1Q8NEP3 725 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 OR13C9Q8NGT0 318 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 OR13D1Q8NGV5 346 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 PP6455Q8WZ26 134 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 LGALS12Q96DT0 336 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 COQ2Q96H96 371 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 C4orf36Q96KX1 117 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
VPS18-203ENST00000558855 HMG20AQ9NP66 347 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 MYRFQ9Y2G1 1151 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 LINC00312Q9Y6C7 94 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 SESN1Q9Y6P5 492 aa10.87□□□□□ -0.67
VPS18-203ENST00000558855 SLC16A6O15403 523 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 OR2H2O95918 312 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 ISG15P05161 165 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 ATP6V1E1P36543 226 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 ATP1B3P54709 279 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 MTCP1P56278 107 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 P2RX3P56373 397 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 MEF2CQ06413 473 aaPredicted RBP10.86□□□□□ -0.67
VPS18-203ENST00000558855 PDZK1IP1Q13113 114 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 TMED1Q13445 227 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 OXLD1Q5BKU9 147 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 Q6P435 159 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 C10orf99Q6UWK7 81 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 UTS2BQ765I0 119 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 FAM220AQ7Z4H9 259 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 RPS4Y2Q8TD47 263 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 FOXRED1Q96CU9 486 aaPredicted RBP10.86□□□□□ -0.67
VPS18-203ENST00000558855 C10orf35Q96D05 121 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 MALSU1Q96EH3 234 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 OPALINQ96PE5 141 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 PPIL3Q9H2H8 161 aaKnown RBP10.86□□□□□ -0.67
VPS18-203ENST00000558855 TMEM133Q9H2Q1 129 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 SEBOXQ9HB31 216 aaPredicted RBP10.86□□□□□ -0.67
VPS18-203ENST00000558855 ZNF286AQ9HBT8 521 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms