RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GTF2F2P13984 249 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 CD99P14209 185 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 SERPINB10P48595 397 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 PITPNBP48739 271 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 SEC61A1P61619 476 aaKnown RBP17.72■□□□□ 0.43
CASC4-204ENST00000557945 IL13RA1P78552 427 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 SCN1BQ07699 218 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 TMEM249Q2WGJ8 235 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 ESCO2Q56NI9 601 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 SPIN3Q5JUX0 258 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 ZNF788Q6ZQV5 615 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 FAM46BQ96A09 425 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 SLC25A28Q96A46 364 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 MED30Q96HR3 178 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 C18orf12Q96KH6 178 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 C1orf147Q96MC9 270 aaPredicted RBP17.72■□□□□ 0.43
CASC4-204ENST00000557945 GAFA1Q96PS6 74 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 DNTTIP1Q9H147 329 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 BANF2Q9H503 90 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 KAAG1Q9UBP8 84 aa17.72■□□□□ 0.43
CASC4-204ENST00000557945 A0A0G2JK05 382 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 FAM157AC9JC47 383 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 AIPO00170 330 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 SH2D1BO14796 132 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 BPNT1O95861 308 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 SELLP14151 372 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 ARSBP15848 533 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 CPT2P23786 658 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 RANBP1P43487 201 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 CAPZA1P52907 286 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 ZNF146Q15072 292 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 CTF1Q16619 201 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 PIGYQ3MUY2 71 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 FAM166AQ6J272 317 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 Q8NFD4 153 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 CST11Q9H112 138 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 KCNK15Q9H427 330 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 LPAR2Q9HBW0 351 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 METRNQ9UJH8 293 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 ST3GAL6Q9Y274 331 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 MAST4O15021 2626 aa17.71■□□□□ 0.43
CASC4-204ENST00000557945 FLNAP21333 2647 aaKnown RBP17.7■□□□□ 0.42
CASC4-204ENST00000557945 CR1P17927 2039 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 DVL1O14640 695 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 SIGLEC5O15389 551 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 PHF1O43189 567 aaPredicted RBP17.7■□□□□ 0.42
CASC4-204ENST00000557945 NDUFB3O43676 98 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 NOL3O60936 208 aaKnown RBP17.7■□□□□ 0.42
CASC4-204ENST00000557945 CHRM2P08172 466 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 VSIG8P0DPA2 414 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 SLC2A2P11168 524 aaPredicted RBP17.7■□□□□ 0.42
CASC4-204ENST00000557945 GNB2P62879 340 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 COL10A1Q03692 680 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 PDCD1Q15116 288 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 OR10K2Q6IF99 312 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 SFXN4Q6P4A7 337 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 ZNRF1Q8ND25 227 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 TMEM104Q8NE00 496 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 TMEM185AQ8NFB2 350 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 OR51D1Q8NGF3 324 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 FAM3DQ96BQ1 224 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 SDSLQ96GA7 329 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 SSBP3Q9BWW4 388 aaPredicted RBP17.7■□□□□ 0.42
CASC4-204ENST00000557945 SELENOIQ9C0D9 397 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 CLN8Q9UBY8 286 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 DAPK2Q9UIK4 370 aa17.7■□□□□ 0.42
CASC4-204ENST00000557945 SIRPB1O00241 398 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 DEGS1O15121 323 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 MPIG6BO95866 241 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 IL1AP01583 271 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 INHBBP09529 407 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 IGHV4-31P0DP07 118 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 ZNF44P15621 663 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 MGMTP16455 207 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 RPS19P39019 145 aaKnown RBP17.69■□□□□ 0.42
CASC4-204ENST00000557945 GZMKP49863 264 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 RBM11P57052 281 aaKnown RBP17.69■□□□□ 0.42
CASC4-204ENST00000557945 LRRC10Q5BKY1 277 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 ZNF561Q8N587 486 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 ASCC1Q8N9N2 400 aaKnown RBP17.69■□□□□ 0.42
CASC4-204ENST00000557945 OR51T1Q8NGJ9 327 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 ST8SIA4Q92187 359 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 TMUB1Q9BVT8 246 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 MAB21L2Q9Y586 359 aa17.69■□□□□ 0.42
CASC4-204ENST00000557945 A0A0B4J203 849 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 LCN2P80188 198 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 IL13RA2Q14627 380 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 C2orf76Q3KRA6 126 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 WDR25Q64LD2 544 aaPredicted RBP17.68■□□□□ 0.42
CASC4-204ENST00000557945 ZNF841Q6ZN19 808 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 KCNG3Q8TAE7 436 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 RAB2BQ8WUD1 216 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 MRPS24Q96EL2 167 aaKnown RBP17.68■□□□□ 0.42
CASC4-204ENST00000557945 LIN7BQ9HAP6 207 aa17.68■□□□□ 0.42
CASC4-204ENST00000557945 SLC25A10Q9UBX3 287 aaPredicted RBP17.68■□□□□ 0.42
CASC4-204ENST00000557945 CCDC160A6NGH7 325 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 B4DSR2 109 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 GEMIN2O14893 280 aaKnown RBP17.67■□□□□ 0.42
CASC4-204ENST00000557945 FOXH1O75593 365 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 OR7C1O76099 320 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms