RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 GSTT2BP0CG30 244 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 RAB6AP20340 208 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 MPV17P39210 176 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 HTR5AP47898 357 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 SRP9P49458 86 aaKnown RBP10.51□□□□□ -0.73
SHMT2-230ENST00000557427 RAG2P55895 527 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 PPP1CBP62140 327 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 CCL8P80075 99 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 ECH1Q13011 328 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 TATDN3Q17R31 274 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 RNASE12Q5GAN4 147 aaKnown RBP10.51□□□□□ -0.73
SHMT2-230ENST00000557427 GLYATL3Q5SZD4 288 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 OLFML2AQ68BL7 652 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 PGAP1Q75T13 922 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 SIGLECL1Q8N7X8 197 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 OR6F1Q8NGZ6 308 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 OR51E1Q8TCB6 317 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 SLC7A6Q92536 515 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 RDH5Q92781 318 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-230ENST00000557427 MARS2Q96GW9 593 aaKnown RBP10.51□□□□□ -0.73
SHMT2-230ENST00000557427 UQCC2Q9BRT2 126 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 CGGBP1Q9UFW8 167 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-230ENST00000557427 OPN4Q9UHM6 478 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 WNK2Q9Y3S1 2297 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 SPRY3O43610 288 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 IGHV3-13P01766 116 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 ARSBP15848 533 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF20P17024 532 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 RAB3AP20336 220 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-230ENST00000557427 EFNB2P52799 333 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 SSBP1Q04837 148 aaKnown RBP10.5□□□□□ -0.73
SHMT2-230ENST00000557427 SCRN3Q0VDG4 424 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 PLA2G7Q13093 441 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 UNQ6126/PRO20091Q6UXV3 157 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 RFPL4BQ6ZWI9 263 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 FAM57BQ71RH2 274 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 NANPQ8TBE9 248 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 KLF14Q8TD94 323 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-230ENST00000557427 SPTSSAQ969W0 71 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 PGAM5Q96HS1 289 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 GPR84Q9NQS5 396 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 DECR2Q9NUI1 292 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF319Q9P2F9 582 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 FBLN5Q9UBX5 448 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF221Q9UK13 617 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 ALG5Q9Y673 324 aa10.5□□□□□ -0.73
SHMT2-230ENST00000557427 SULT1C2O00338 296 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 PPIHO43447 177 aaKnown RBP10.49□□□□□ -0.73
SHMT2-230ENST00000557427 BPNT1O95861 308 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 DHFRP00374 187 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 TCRBP04435 133 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 ALDOBP05062 364 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 GNALP38405 381 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF81P51508 661 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 DRAM2Q6UX65 266 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 BTN2A1Q7KYR7 527 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 JAGN1Q8N5M9 183 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 OR14K1Q8NGZ2 314 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 PHF21AQ96BD5 680 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 C10orf35Q96D05 121 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 CMBLQ96DG6 245 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 ST6GAL2Q96JF0 529 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 POFUT1Q9H488 388 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 HRASLSQ9HDD0 168 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 STARD10Q9Y365 291 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 V9GYS6 101 aa10.49□□□□□ -0.73
SHMT2-230ENST00000557427 ARHGAP32A7KAX9 2087 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 TRAV18A0A075B6X5 111 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 PLSCR5A0PG75 271 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 C7orf66A4D0T2 115 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 M0R135 149 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 RBBP9O75884 186 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 SCGNO76038 276 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 DBHP09172 617 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 VSIG8P0DPA2 414 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 COX5BP10606 129 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 SLC2A1P11166 492 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 TMEM33P57088 247 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 RSPO1Q2MKA7 263 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-230ENST00000557427 PCGF3Q3KNV8 242 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 KRTAP27-1Q3LI81 207 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 TMEM255AQ5JRV8 349 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 MBNL2Q5VZF2 373 aaKnown RBP10.48□□□□□ -0.73
SHMT2-230ENST00000557427 RAB12Q6IQ22 244 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 Q6ZPA2 131 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 COMMD2Q86X83 199 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 OR52N4Q8NGI2 321 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 OR4D6Q8NGJ1 314 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 OR13C9Q8NGT0 318 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF799Q96GE5 643 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms