RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ECI1P42126 302 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 RAB13P51153 203 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 RPS7P62081 194 aaKnown RBP6.94□□□□□ -1.3
VRK1-206ENST00000557222 RPL11P62913 178 aaKnown RBP6.94□□□□□ -1.3
VRK1-206ENST00000557222 BLCAPP62952 87 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 SLC35A2P78381 396 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 DCTN2Q13561 401 aaKnown RBP6.94□□□□□ -1.3
VRK1-206ENST00000557222 HABP2Q14520 560 aaPredicted RBP6.94□□□□□ -1.3
VRK1-206ENST00000557222 ZNF782Q6ZMW2 699 aaPredicted RBP6.94□□□□□ -1.3
VRK1-206ENST00000557222 GDPD3Q7L5L3 318 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 ENTHD1Q8IYW4 607 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 ELMOD2Q8IZ81 293 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 OR8H2Q8N162 312 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 CCDC54Q8NEL0 328 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 OR5AU1Q8NGC0 362 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 DNAJC9Q8WXX5 260 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 SNX22Q96L94 193 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 ZNF488Q96MN9 340 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 ZNF714Q96N38 554 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 CHID1Q9BWS9 393 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 SLC22A13Q9Y226 551 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 TSSC4Q9Y5U2 329 aaPredicted RBP6.94□□□□□ -1.3
VRK1-206ENST00000557222 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
VRK1-206ENST00000557222 K7EIL1 84 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ATP8B1O43520 1251 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 SRSF10O75494 262 aaKnown RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 DNAJC8O75937 253 aaPredicted RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 CLIC3O95833 236 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 MPIG6BO95866 241 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 PF4V1P10720 104 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 IGLL1P15814 213 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 CCL1P22362 96 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ERP29P30040 261 aaKnown RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 BRS3P32247 399 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 CEBPDP49716 269 aaPredicted RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 FUT6P51993 359 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ARHGDIBP52566 201 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 HCCSP53701 268 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ACTA2P62736 377 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ACTG2P63267 376 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ACTC1P68032 377 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ACTA1P68133 377 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 MS4A2Q01362 244 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 COL10A1Q03692 680 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 EGFEM1PQ0D2K5 195 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 APOFQ13790 326 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 LDLRAD2Q5SZI1 272 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 SLX4IPQ5VYV7 408 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ASRGL1Q7L266 308 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 CENPVQ7Z7K6 275 aaPredicted RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 RTN4RL2Q86UN3 420 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 TMEM219Q86XT9 240 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 Q8IYB0 196 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ASCC1Q8N9N2 400 aaKnown RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 BBS1Q8NFJ9 593 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 OR14K1Q8NGZ2 314 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 C10orf35Q96D05 121 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ASB9Q96DX5 294 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 LRGUKQ96M69 825 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 CCDC140Q96MF4 163 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 FAM107BQ9H098 131 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 ZMAT5Q9UDW3 170 aaKnown RBP6.93□□□□□ -1.3
VRK1-206ENST00000557222 OR14J1Q9UGF5 321 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 SLC7A11Q9UPY5 501 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 SNX5Q9Y5X3 404 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 SESN1Q9Y6P5 492 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 R4GMQ9 66 aa6.93□□□□□ -1.3
VRK1-206ENST00000557222 IGHV2-26A0A0B4J1V2 119 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 A0A1B0GTI1 187 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 TCRBV4S1A1TA0A5B7 111 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 CCDC182A6NF36 153 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 AQP12BA6NM10 295 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 E9PQ18 207 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 LOC110117498-PIK3R3F6TDL0 507 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 M0QZK8 103 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 GNGT2O14610 69 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 PIPP12273 146 aaPredicted RBP6.92□□□□□ -1.3
VRK1-206ENST00000557222 HTR1DP28221 377 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 PEX2P28328 305 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 EDDM3BP56851 147 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 BDH1Q02338 343 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 SLC34A1Q06495 639 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 DYNC1I2Q13409 638 aaKnown RBP6.92□□□□□ -1.3
VRK1-206ENST00000557222 SNAPC1Q16533 368 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 PLA1AQ53H76 456 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 DMRTC1Q5HYR2 192 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 BCL2L15Q5TBC7 163 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 OR52W1Q6IF63 320 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 ZNF322Q6U7Q0 402 aaPredicted RBP6.92□□□□□ -1.3
VRK1-206ENST00000557222 ETV3LQ6ZN32 361 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 AQP12AQ8IXF9 295 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 ADGRG5Q8IZF4 528 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 Q8N1Y9 231 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 OR4X2Q8NGF9 303 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 CAPSLQ8WWF8 208 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 CREB3L1Q96BA8 519 aa6.92□□□□□ -1.3
VRK1-206ENST00000557222 NRBF2Q96F24 287 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms