RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ABCA4P78363 2273 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 A0A0U1RQV5 110 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 RNF222A6NCQ9 220 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 M0R036 132 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 LYZL6O75951 148 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 TPPPO94811 219 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 HPP00738 406 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 SELEP16581 610 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 ID4P47928 161 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 PPT1P50897 306 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 QRFPP83859 136 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 PRDX4Q13162 271 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 GNMTQ14749 295 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 RSPO1Q2MKA7 263 aaPredicted RBP13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 TMEM268Q5VZI3 342 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 GGNBP1Q5YKI7 109 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 IQCF2Q8IXL9 164 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 TMEM251Q8N6I4 163 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 EXTL1Q92935 676 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 NME2P1O60361 137 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 MPGP29372 298 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 EIF5AL1Q6IS14 154 aaKnown RBP13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 LHFPL2Q6ZUX7 228 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 CPEB3Q8NE35 698 aaKnown RBP13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 BVESQ8NE79 360 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 RRNAD1Q96FB5 475 aaKnown RBP13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 PCDHB16Q9NRJ7 776 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 GHRLQ9UBU3 117 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 MLXQ9UH92 298 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 MGAQ8IWI9 3026 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 GPR31O00270 319 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 CD63P08962 238 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 CD80P33681 288 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 PTGER4P35408 488 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 PDZK1IP1Q13113 114 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 RPUSD3Q6P087 351 aaKnown RBP13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 CD300LFQ8TDQ1 290 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 TMEM54Q969K7 222 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 MRGPRFQ96AM1 343 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 TTTY12Q9BZ98 90 aa13.31□□□□□ -0.28
TMEM55B-207ENST00000557041 LRRC3CA6NJW4 275 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 MELTFP08582 738 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 OR8U9P0C7N5 309 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 PRF1P14222 555 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 BCL3P20749 454 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 FUT6P51993 359 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 RNF141Q8WVD5 230 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 C20orf24Q9BUV8 137 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 PRELID1Q9Y255 219 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 M0R296 226 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 SIRPB1O00241 398 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 ONECUT2O95948 504 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 RBM39Q14498 530 aaKnown RBP13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 TMEM230Q96A57 120 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 SF3B5Q9BWJ5 86 aaKnown RBP13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 SAV1Q9H4B6 383 aaPredicted RBP13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 PRSS50Q9UI38 385 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 IGKV1-27A0A075B6S5 117 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 H0YIZ8 118 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 KLRC4-KLRK1H3BQV0 150 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 CST2P09228 141 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 CAMLGP49069 296 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 FAM3AP98173 230 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 C10orf128Q5T292 105 aa13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 RTBDNQ9BSG5 229 aaPredicted RBP13.3□□□□□ -0.28
TMEM55B-207ENST00000557041 SPAARA0A1B0GVQ0 90 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 SLC34A2O95436 690 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 FUT3P21217 361 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 H3F3CQ6NXT2 135 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 GGNQ86UU5 652 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 CNTNAP3BQ96NU0 1288 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 SLC25A32Q9H2D1 315 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 CDH20Q9HBT6 801 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 SYNGR3O43761 229 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 SNAPC5O75971 98 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 VHLLQ6RSH7 139 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 SPAG16Q8N0X2 631 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 C1orf147Q96MC9 270 aaPredicted RBP13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 OBP2BQ9NPH6 170 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 CST7O76096 145 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 TSPAN15O95858 294 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 GP1BAP07359 652 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 AADACP22760 399 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 OVCH2Q7RTZ1 564 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 NUFIP2Q7Z417 695 aaKnown RBP13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 DEFB124Q8NES8 71 aa13.29□□□□□ -0.28
TMEM55B-207ENST00000557041 ZNF716A6NP11 495 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 ZP3P21754 424 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 ZDHHC23Q8IYP9 409 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 OCSTAMPQ9BR26 566 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 RAB18Q9NP72 206 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 RASL12Q9NYN1 266 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 ZNF175Q9Y473 711 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 PLCE1Q9P212 2302 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 MUC6Q6W4X9 2439 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 IGKV1-12A0A0C4DH73 117 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms