RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 GCNT4Q9P109 453 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 ORC6Q9Y5N6 252 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 RGS12O14924 1447 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 IGHV2OR16-5A0A0B4J2B6 119 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 TEX46H3BTG2 121 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 DHRS3O75911 302 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 PTTG1O95997 202 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 GABRA4P48169 554 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 CASP8Q14790 479 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 ZNF404Q494X3 552 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 CDNFQ49AH0 187 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 BEX5Q5H9J7 111 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 MLIPQ5VWP3 458 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 ANGPTL8Q6UXH0 198 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 FAM122BQ7Z309 247 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 VTCN1Q7Z7D3 282 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 LUZP2Q86TE4 346 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 LINC00596Q86U02 117 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 RBM45Q8IUH3 476 aaKnown RBP0.47□□□□□ -2.33
SNX6-204ENST00000555541 BBS5Q8N3I7 341 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 TCAIMQ8N3R3 496 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 GPATCH11Q8N954 259 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 GABRG3Q99928 467 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 MRPL32Q9BYC8 188 aaKnown RBP0.47□□□□□ -2.33
SNX6-204ENST00000555541 SLC19A3Q9BZV2 496 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 MFSD1Q9H3U5 465 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 PRORYQ9H606 182 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 VPREB3Q9UKI3 123 aa0.47□□□□□ -2.33
SNX6-204ENST00000555541 HACD1B0YJ81 288 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 KLRC4-KLRK1H3BQV0 150 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 COX7A2P2O60397 106 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 SH2D1AO60880 128 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 NAPSAO96009 420 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 UBCP0CG48 685 aaKnown RBP0.46□□□□□ -2.34
SNX6-204ENST00000555541 GPR1P46091 355 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 SPANXN2Q5MJ10 180 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 TMEM215Q68D42 235 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 MAL2Q969L2 176 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 YPEL4Q96NS1 127 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 RETNLBQ9BQ08 111 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 PRSS16Q9NQE7 514 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 KLF12Q9Y4X4 402 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 CACNA1SQ13698 1873 aa0.46□□□□□ -2.34
SNX6-204ENST00000555541 ARHGAP32A7KAX9 2087 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 FNDC10F2Z333 226 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 PLPP3O14495 311 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 AGTP01019 485 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 GSTM3P21266 225 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 CNTFRP26992 372 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 CLDN6P56747 220 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 PAFAH1B2P68402 229 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 RAD51Q06609 339 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 THOC7Q6I9Y2 204 aaKnown RBP0.45□□□□□ -2.34
SNX6-204ENST00000555541 TMEM53Q6P2H8 277 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 ZNF773Q6PK81 442 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 EIF3MQ7L2H7 374 aaKnown RBP0.45□□□□□ -2.34
SNX6-204ENST00000555541 ARL6IP6Q8N6S5 226 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 OR10P1Q8NGE3 313 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 ZFAND1Q8TCF1 268 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 TSEN15Q8WW01 171 aaKnown RBP0.45□□□□□ -2.34
SNX6-204ENST00000555541 TMED9Q9BVK6 235 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 PORCNQ9H237 461 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 ELOVL6Q9H5J4 265 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 TDRD3Q9H7E2 651 aaKnown RBP0.45□□□□□ -2.34
SNX6-204ENST00000555541 ROS1P08922 2347 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 NOS1P29475 1434 aa0.45□□□□□ -2.34
SNX6-204ENST00000555541 RTTNQ86VV8 2226 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 LOC389332A0A1B0GUA5 103 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 H3BN98 237 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 LECT2O14960 151 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 POP7O75817 140 aaKnown RBP0.44□□□□□ -2.34
SNX6-204ENST00000555541 GPR75O95800 540 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 GCGP01275 180 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 GPX1P07203 203 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 OR12D1P0DN82 309 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 NIPAL1Q6NVV3 410 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 SLC25A45Q8N413 288 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 CCNYL1Q8N7R7 359 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 OR2M3Q8NG83 312 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 CCDC77Q9BR77 488 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 FAM192AQ9GZU8 254 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 NAA50Q9GZZ1 169 aaKnown RBP0.44□□□□□ -2.34
SNX6-204ENST00000555541 MRPS30Q9NP92 439 aaKnown RBP0.44□□□□□ -2.34
SNX6-204ENST00000555541 ADA2Q9NZK5 511 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 TFR2Q9UP52 801 aa0.44□□□□□ -2.34
SNX6-204ENST00000555541 PXDNLA1KZ92 1463 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 SLC22A20A6NK97 555 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 DFFAO00273 331 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 TRDMT1O14717 391 aaKnown RBP0.43□□□□□ -2.34
SNX6-204ENST00000555541 GYG2O15488 501 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 PSKH1P11801 424 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 GABRA1P14867 456 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 ATP6V0D1P61421 351 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 YWHAEP62258 255 aaKnown RBP0.43□□□□□ -2.34
SNX6-204ENST00000555541 ATP6AP1LQ52LC2 224 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 C10orf91Q5T1B1 145 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 SELENOHQ8IZQ5 122 aaKnown RBP0.43□□□□□ -2.34
SNX6-204ENST00000555541 CA5BP1Q8WTZ4 195 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 DDIT4LQ96D03 193 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 OR52B2Q96RD2 323 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms