RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FGF12P61328 243 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 C6orf201Q7Z4U5 140 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 FAM58AQ8N1B3 248 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 FAM89BQ8N5H3 189 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 GCSAMQ8N6F7 178 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 POC1AQ8NBT0 407 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 Q8NFD4 153 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 OR10R2Q8NGX6 335 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 SAP30LQ9HAJ7 183 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 ABCB10Q9NRK6 738 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 POLDIP2Q9Y2S7 368 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 KIAA2026Q5HYC2 2103 aa9.05□□□□□ -0.96
TDP1-211ENST00000555178 METTL21EPA6NDL7 271 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 ZNF780AO75290 641 aaPredicted RBP9.04□□□□□ -0.96
TDP1-211ENST00000555178 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
TDP1-211ENST00000555178 CD55P08174 381 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CD3GP09693 182 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CSF3P09919 207 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 TNFSF4P23510 183 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CPT2P23786 658 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 BLVRBP30043 206 aaPredicted RBP9.04□□□□□ -0.96
TDP1-211ENST00000555178 PPOXP50336 477 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CAPZA1P52907 286 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 SCN1BQ07699 218 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 SFRP4Q6FHJ7 346 aaPredicted RBP9.04□□□□□ -0.96
TDP1-211ENST00000555178 ELP2Q6IA86 826 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CDH24Q86UP0 819 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 Q8N402 240 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 OR5T2Q8NGG2 359 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 NUDCD2Q8WVJ2 157 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 PHF21AQ96BD5 680 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 URM1Q9BTM9 101 aaKnown RBP9.04□□□□□ -0.96
TDP1-211ENST00000555178 MS4A5Q9H3V2 200 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 DIABLOQ9NR28 239 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 DOCK11Q5JSL3 2073 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CCDC168Q8NDH2 2452 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 ABCA2Q9BZC7 2435 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 LINC00854A0A1B0GVQ3 168 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 GLRA1P23415 457 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CD80P33681 288 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 GATA4P43694 442 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 IKZF1Q13422 519 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 GPR176Q14439 515 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 ZNF260Q3ZCT1 412 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 PYHIN1Q6K0P9 492 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 Q6ZTK2 550 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 CELF2-AS1Q8N7Q2 184 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 OR52I2Q8NH67 350 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 RAB3CQ96E17 227 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 FN3KRPQ9HA64 309 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 DECR2Q9NUI1 292 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 OR14J1Q9UGF5 321 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 PPP1R3CQ9UQK1 317 aa9.04□□□□□ -0.96
TDP1-211ENST00000555178 SVEP1Q4LDE5 3571 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 A0A1B0GW55 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L2P0CJ85 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L3P0CJ86 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L4P0CJ87 422 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L5P0CJ88 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L6P0CJ89 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L7P0CJ90 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 IL7P13232 177 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 HIST1H1DP16402 221 aaKnown RBP9.03□□□□□ -0.96
TDP1-211ENST00000555178 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 CDNFQ49AH0 187 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 STEAP3Q658P3 488 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4L9Q6RFH8 374 aaPredicted RBP9.03□□□□□ -0.96
TDP1-211ENST00000555178 ACP7Q6ZNF0 438 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 OR56B1Q8NGI3 324 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 CCL17Q92583 94 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 BORCS5Q969J3 196 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 CCL19Q99731 98 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 SULT4A1Q9BR01 284 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 HDHD3Q9BSH5 251 aaPredicted RBP9.03□□□□□ -0.96
TDP1-211ENST00000555178 FAIMQ9NVQ4 179 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DUX4Q9UBX2 424 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 KLK11Q9UBX7 282 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 METRNQ9UJH8 293 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DSCAML1Q8TD84 2053 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 PRRC2AP48634 2157 aaKnown RBP9.03□□□□□ -0.96
TDP1-211ENST00000555178 A0A1W2PQ09 198 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 SRRM5B3KS81 715 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 MFNGO00587 321 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 UPK1BO75841 260 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 LHBP01229 141 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 AMY2BP19961 511 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 CHATP28329 748 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 NR4A2P43354 598 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 TESK1Q15569 626 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 ATAD3CQ5T2N8 411 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 C16orf87Q6PH81 154 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 FGFRL1Q8N441 504 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 BPIFB2Q8N4F0 458 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 DEFB108BQ8NET1 73 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms