RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PHF3Q92576 2039 aaKnown RBP3.21□□□□□ -1.9
SCFD1-211ENST00000554437 CIB4A0PJX0 185 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 A6NDX4 124 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 MYL12BO14950 172 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 IGKV1D-16P01601 117 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 CTSLP07711 333 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 GNAO1P09471 354 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 ICAM2P13598 275 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 ME2P23368 584 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 MAGEA12P43365 314 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 GCLMP48507 274 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 NDUFA8P51970 172 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 NCBP2P52298 156 aaKnown RBP eCLIP3.21□□□□□ -1.9
SCFD1-211ENST00000554437 TAS2R46P59540 309 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 FAM3AP98173 230 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 PON3Q15166 354 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 SHHQ15465 462 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 MOGQ16653 247 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 LRRC10Q5BKY1 277 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 HHATQ5VTY9 493 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 HACD4Q5VWC8 232 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 H2AFVQ71UI9 128 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 GID4Q8IVV7 300 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 RIMKLAQ8IXN7 391 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 LGI3Q8N145 548 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 STK40Q8N2I9 435 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 Q8N9W7 124 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 GPR26Q8NDV2 337 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 OR4S2Q8NH73 311 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 OR1S1Q8NH92 325 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 HAVCR2Q8TDQ0 301 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 C16orf78Q8WTQ4 265 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 SRSF12Q8WXF0 261 aaKnown RBP3.21□□□□□ -1.9
SCFD1-211ENST00000554437 RAD51AP1Q96B01 352 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 FAAP24Q9BTP7 215 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 ULBP1Q9BZM6 244 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 CCL28Q9NRJ3 127 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 NEUROG3Q9Y4Z2 214 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 ALG5Q9Y673 324 aa3.21□□□□□ -1.9
SCFD1-211ENST00000554437 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 TRAV8-6A0A0B4J262 113 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 METTL15A6NJ78 407 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 CD99P14209 185 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 UCHL3P15374 230 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 ATF1P18846 271 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 TCN2P20062 427 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 RAB3AP20336 220 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
SCFD1-211ENST00000554437 PYCR1P32322 319 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 CD79BP40259 229 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 PMELP40967 661 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 CYB561P49447 251 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 TCL1AP56279 114 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 REG3AQ06141 175 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 LAMTOR4Q0VGL1 99 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 TAF1AQ15573 450 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-211ENST00000554437 KCTD16Q68DU8 428 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 LAMTOR1Q6IAA8 161 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 FAM131AQ6UXB0 335 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 ZNF493Q6ZR52 646 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 RFLNAQ6ZTI6 216 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 FAM183BPQ6ZVS7 135 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 FAM231DQ6ZW35 169 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 S100A7AQ86SG5 101 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 TBC1D19Q8N5T2 526 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 OR10G9Q8NGN4 311 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 NTAN1Q96AB6 310 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 DCPSQ96C86 337 aaKnown RBP3.2□□□□□ -1.9
SCFD1-211ENST00000554437 AURKBQ96GD4 344 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-211ENST00000554437 BIRC8Q96P09 236 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 METTL26Q96S19 204 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 MS4A6AQ9H2W1 248 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 C8orf4Q9NR00 106 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 ARL5AQ9Y689 179 aa3.2□□□□□ -1.9
SCFD1-211ENST00000554437 IGLV3-16A0A075B6K0 115 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 A0A0J9YXV3 536 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 RBFOX3A6NFN3 312 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 KPNA3O00505 521 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-211ENST00000554437 FADS1O60427 444 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 REM1O75628 298 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 FABP3P05413 133 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 IGKV5-2P06315 115 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 CHTF8P0CG12 524 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 CXCR1P25024 350 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 PSMB2P49721 201 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 ZNF138P52744 262 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 HBG1P69891 147 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 HBG2P69892 147 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 PRDX1Q06830 199 aaKnown RBP3.19□□□□□ -1.9
SCFD1-211ENST00000554437 INCA1Q0VD86 236 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 PPP1R1AQ13522 171 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 RGNQ15493 299 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 SLC9A3R2Q15599 337 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 LRRC26Q2I0M4 334 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 CLEC12AQ5QGZ9 265 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 CASC10Q5T4H9 136 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 XKRXQ6PP77 449 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 NCCRP1Q6ZVX7 275 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-211ENST00000554437 ITPRIPQ8IWB1 547 aa3.19□□□□□ -1.9
SCFD1-211ENST00000554437 CCNYL1Q8N7R7 359 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms