RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FN3KRPQ9HA64 309 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 DYNLRB1Q9NP97 96 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 RHBDL2Q9NX52 303 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 IL36GQ9NZH8 169 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 EXTL2Q9UBQ6 330 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR5V1Q9UGF6 321 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 EDARQ9UNE0 448 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 PIEZO2Q9H5I5 2752 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 CFAP54Q96N23 3096 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CADP27708 2225 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM272A0A1B0GTI8 110 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 A6NLC8 198 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 LRRC30A6NM36 301 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 C17orf100A8MU93 164 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM14DPA8MWL7 114 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 DEFB108AA8MXU0 73 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 E7EQL1 145 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 J3QT63 122 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SH2D1BO14796 132 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 LDLRAD4O15165 306 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CTDSPLO15194 276 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 NOS1APO75052 506 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ATP6V1G1O75348 118 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 PAHP00439 452 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 GLAP06280 429 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 GRPP07492 148 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CD55P08174 381 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 GSTT2BP0CG30 244 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 COX6B1P14854 86 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ELK1P19419 428 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SERPINA2P20848 420 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ANOS1P23352 680 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 MPZP25189 248 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CFHR2P36980 270 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 OR3A4PP47883 348 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 MMP15P51511 669 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CLDN12P56749 244 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 DEFA1P59665 94 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 DEFA3P59666 94 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ZP1P60852 638 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SNRPD2P62316 118 aaKnown RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 MRPS15P82914 257 aaKnown RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ALKBH6Q3KRA9 238 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SLC22A6Q4U2R8 563 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 C4orf46Q504U0 113 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 PYDC2Q56P42 97 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM69Q5SWH9 247 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 HACD4Q5VWC8 232 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CNIH2Q6PI25 160 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 HAGHLQ6PII5 290 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SLC25A26Q70HW3 274 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CMTM4Q8IZR5 234 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 C1orf87Q8N0U7 546 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 MUC15Q8N387 334 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF611Q8N823 705 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SCCPDHQ8NBX0 429 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CHST4Q8NCG5 386 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 C19orf18Q8NEA5 215 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 Q8NFD4 153 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 OR5H6Q8NGV6 325 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 OR10R2Q8NGX6 335 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 PPP1R35Q8TAP8 253 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 LGALS14Q8TCE9 139 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 FCAMRQ8WWV6 532 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 AQP3Q92482 292 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 RFT1Q96AA3 541 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ELMOD3Q96FG2 381 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CLUHP3Q96NS8 147 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SPACA5Q96QH8 159 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 GPHA2Q96T91 129 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM204Q9BSN7 226 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CCDC32Q9BV29 185 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 TM2D1Q9BX74 207 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SELENOIQ9C0D9 397 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 RAB1BQ9H0U4 201 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SEBOXQ9HB31 216 aaPredicted RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 SPACA1Q9HBV2 294 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 PALMDQ9NP74 551 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 CBLN4Q9NTU7 201 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 PLEKHJ1Q9NW61 149 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 TAS2R8Q9NYW2 309 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 FZR1Q9UM11 496 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 MRPS7Q9Y2R9 242 aaKnown RBP4.24□□□□□ -1.73
VTI1B-202ENST00000553619 ICE1Q9Y2F5 2266 aa4.24□□□□□ -1.73
VTI1B-202ENST00000553619 HIVEP3Q5T1R4 2406 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 IGKV1-27A0A075B6S5 117 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 TRAV18A0A075B6X5 111 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 hCG_1807616A0A1W2PRN6 198 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 ISPDA4D126 451 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 A6NNC1 897 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 CENPXA8MT69 81 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SERPINE3A8MV23 424 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 F5H5P2 479 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 H0YL77 283 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 H7C1Q1 480 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 CDIPTO14735 213 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 HS3ST1O14792 307 aa4.23□□□□□ -1.73
VTI1B-202ENST00000553619 SPRY1O43609 319 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms