RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 BEX1Q9HBH7 125 aa14.79□□□□□ -0.04
SHMT2-206ENST00000553529 ZNF581Q9P0T4 197 aa14.79□□□□□ -0.04
SHMT2-206ENST00000553529 RNF114Q9Y508 228 aa14.79□□□□□ -0.04
SHMT2-206ENST00000553529 C17orf98A8MV24 154 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 WIPF1O43516 503 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 LALBAP00709 142 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 GDNFP39905 211 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 OR3A1P47881 315 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 SOX2P48431 317 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 RBP2P50120 134 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 ATP1B3P54709 279 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 FBLN7Q53RD9 439 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 FAM58AQ8N1B3 248 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 BEND2Q8NDZ0 799 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 OR13C5Q8NGS8 318 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 PIFOQ8TCI5 191 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 PP6455Q8WZ26 134 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 ITFG2Q969R8 447 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 DMRTB1Q96MA1 342 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-206ENST00000553529 CLEC2DQ9UHP7 191 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 HHLA2Q9UM44 414 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 GSTK1Q9Y2Q3 226 aa14.78□□□□□ -0.04
SHMT2-206ENST00000553529 SF3B6Q9Y3B4 125 aaKnown RBP14.78□□□□□ -0.04
SHMT2-206ENST00000553529 POM121CA8CG34 1229 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 GABRR1P24046 479 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 CCR9P51686 369 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 PROK1P58294 105 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 PDZK1IP1Q13113 114 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 GRK1Q15835 563 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 DHRS7BQ6IAN0 325 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-206ENST00000553529 BRICD5Q6PL45 260 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 UTS2BQ765I0 119 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 OR8H2Q8N162 312 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 ZSCAN4Q8NAM6 433 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-206ENST00000553529 OR5D13Q8NGL4 314 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 CYYR1Q96J86 154 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 CITED1Q99966 193 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 DPAGT1Q9H3H5 408 aa14.77□□□□□ -0.05
SHMT2-206ENST00000553529 SMPD3Q9NY59 655 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-206ENST00000553529 TRBV2A0A0J9YWF9 115 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 OR2H2O95918 312 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 SERPINA3P01011 423 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 CHRM2P08172 466 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ZP1P60852 638 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ACTA2P62736 377 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ACTG2P63267 376 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ACSM1Q08AH1 577 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF691Q5VV52 312 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 SLC35E4Q6ICL7 350 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 LAIR2Q6ISS4 152 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 CCBE1Q6UXH8 406 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-206ENST00000553529 GDPD3Q7L5L3 318 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 KCTD20Q7Z5Y7 419 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ZFP41Q8N8Y5 198 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 DNAAF1Q8NEP3 725 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 CYGBQ8WWM9 190 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 FAM234AQ9H0X4 552 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 SLITRK2Q9H156 845 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF696Q9H7X3 374 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 HMG20AQ9NP66 347 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 TAS2R4Q9NYW5 299 aa14.76□□□□□ -0.05
SHMT2-206ENST00000553529 ODF3BA8MYP8 253 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 ARG1P05089 322 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 ZNF728P0DKX0 622 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 IGHV1-8P0DP01 117 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 SCN1BQ07699 218 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 HABP2Q14520 560 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-206ENST00000553529 ZSCAN26Q16670 478 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 PRAMEF5Q5TYX0 476 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 TREML4Q6UXN2 200 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 LHFPL2Q6ZUX7 228 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 SYS1Q8N2H4 156 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 OR10K1Q8NGX5 313 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 C10orf35Q96D05 121 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 SNX22Q96L94 193 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 ZCCHC4Q9H5U6 513 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 NEK6Q9HC98 313 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 FOXJ3Q9UPW0 622 aa14.75□□□□□ -0.05
SHMT2-206ENST00000553529 HSPB6O14558 160 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 KDM4BO94953 1096 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 TSPAN15O95858 294 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 FADS2O95864 444 aaKnown RBP14.74□□□□□ -0.05
SHMT2-206ENST00000553529 HCKP08631 526 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 GNAO1P09471 354 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 GLIPR1P48060 266 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 RAB40BQ12829 278 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 RCN1Q15293 331 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 LRRC75BQ2VPJ9 315 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 MIDNQ504T8 468 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 Q6P435 159 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 GDPGP1Q6ZNW5 385 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 TMEM219Q86XT9 240 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 C11orf44Q8N8P7 122 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 CCDC54Q8NEL0 328 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 OR5AK2Q8NH90 309 aa14.74□□□□□ -0.05
SHMT2-206ENST00000553529 TSEN15Q8WW01 171 aaKnown RBP14.74□□□□□ -0.05
SHMT2-206ENST00000553529 PPIL3Q9H2H8 161 aaKnown RBP14.74□□□□□ -0.05
SHMT2-206ENST00000553529 MRPS18AQ9NVS2 196 aaKnown RBP14.74□□□□□ -0.05
SHMT2-206ENST00000553529 CAB39Q9Y376 341 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms