RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ST3GAL6Q9Y274 331 aa11.18□□□□□ -0.62
SHMT2-205ENST00000553474 CNTRLQ7Z7A1 2325 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
SHMT2-205ENST00000553474 MPTX1A8MV57 137 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF587BE7ETH6 402 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 MASP2O00187 686 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 NEURL1O76050 574 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 JTBO76095 146 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 SYNGR4O95473 234 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 APOC3P02656 99 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF708P17019 499 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 FUT3P21217 361 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 GLP1RP43220 463 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 LHX2P50458 406 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 RBM11P57052 281 aaKnown RBP11.17□□□□□ -0.62
SHMT2-205ENST00000553474 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 IAH1Q2TAA2 248 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-205ENST00000553474 ABCA11PQ4W5N1 156 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF585AQ6P3V2 769 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 TMEM200AQ86VY9 491 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 FAM185AQ8N0U4 392 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 OR51F2Q8NH61 342 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 ADAMTS17Q8TE56 1095 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 SULT4A1Q9BR01 284 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 FOXJ2Q9P0K8 574 aa11.17□□□□□ -0.62
SHMT2-205ENST00000553474 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 DEDDO75618 318 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 CST4P01036 141 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 HOXB5P09067 269 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 EDN3P14138 238 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 PIGPP57054 158 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 SRPXP78539 464 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF273Q14593 569 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 RNPS1Q15287 305 aaKnown RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 TSPO2Q5TGU0 170 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 FBXL14Q8N1E6 418 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 OR1S2Q8NGQ3 325 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 SCNM1Q9BWG6 230 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 MMP26Q9NRE1 261 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 LPAR3Q9UBY5 353 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 WDFY3Q8IZQ1 3526 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 AKAP13Q12802 2813 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 IGKV1-12A0A0C4DH73 117 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 PINLYPA6NC86 204 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 C9orf172C9J069 976 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 K7EPK0 472 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 IGKV1D-12P01611 117 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 SFTPBP07988 381 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 FAM157CP0CG43 387 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 ARR3P36575 388 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 CLDN18P56856 261 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 FAM71E2Q8N5Q1 922 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 BPIFCQ8NFQ6 507 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 OR5T2Q8NGG2 359 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 PIGCQ92535 297 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 MOB3AQ96BX8 217 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF845Q96IR2 970 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 SMIM8Q96KF7 97 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 HDHD3Q9BSH5 251 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-205ENST00000553474 GSKIPQ9P0R6 139 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
SHMT2-205ENST00000553474 PCSK5Q92824 1860 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 AHCTF1Q8WYP5 2266 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 MSGN1A6NI15 193 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 E5RGE8 158 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 ATG12O94817 140 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 HKR1P10072 659 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 S100A10P60903 97 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 GGNBP1Q5YKI7 109 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 LINC00596Q86U02 117 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 SVBPQ8N300 66 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 ZNF611Q8N823 705 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 FGFBP3Q8TAT2 258 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 RTN4IP1Q8WWV3 396 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-205ENST00000553474 LRRC46Q96FV0 321 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 ACKR4Q9NPB9 350 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 ASF1BQ9NVP2 202 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 NSG2Q9Y328 171 aa11.15□□□□□ -0.62
SHMT2-205ENST00000553474 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 PQLC2LA1A4F0 135 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 MSTNO14793 375 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 TSPAN4O14817 238 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 PATE4P0C8F1 98 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
SHMT2-205ENST00000553474 TMEM187Q14656 261 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 PIGYQ3MUY2 71 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 DCAF10Q5QP82 559 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 C10orf91Q5T1B1 145 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms