RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 KIR3DL3Q8N743 410 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 LY6G5BQ8NDX9 201 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 OR52N4Q8NGI2 321 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 OR5M11Q96RB7 305 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 JMJD8Q96S16 334 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 SIRPDQ9H106 197 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 RHOFQ9HBH0 211 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 ZNF69Q9UC07 566 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 ATRQ13535 2644 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 A0A1W2PPH5 198 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 RNF212BA8MTL3 300 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 TK1P04183 234 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 HSMCR30P0CW71 290 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 CALCBP10092 127 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 MMP9P14780 707 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 BMXP51813 675 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 ZP1P60852 638 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 RPS11P62280 158 aaKnown RBP eCLIP15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 RPL31P62899 125 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 IRF3Q14653 427 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 ASPHD2Q6ICH7 369 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 GDPD3Q7L5L3 318 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 RNF144BQ7Z419 303 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 PPP1R35Q8TAP8 253 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 TMEM158Q8WZ71 300 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 UFD1Q92890 307 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 TBX15Q96SF7 602 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 S100A13Q99584 98 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 HMG20AQ9NP66 347 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 EXOSC4Q9NPD3 245 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 IL36RNQ9UBH0 155 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 GSTK1Q9Y2Q3 226 aa15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 LSM2Q9Y333 95 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-216ENST00000552301 IGKV1-12A0A0C4DH73 117 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 A0A1W2PPK0 400 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 K7N7A8 449 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 GABRPO00591 440 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 IGKV1D-12P01611 117 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 ALDOBP05062 364 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 FSTP19883 344 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 GABRR1P24046 479 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 DUSP1P28562 367 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 ZNF93P35789 620 aaPredicted RBP15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 BPIFB3P59826 476 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 RSU1Q15404 277 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 USP43Q70EL4 1123 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 VMO1Q7Z5L0 202 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 MS4A15Q8N5U1 240 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 PXT1Q8NFP0 134 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 OR5D13Q8NGL4 314 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 TBC1D15Q8TC07 691 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 LHX4Q969G2 390 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 ORAI1Q96D31 301 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 SNX22Q96L94 193 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 TMED9Q9BVK6 235 aa15.23■□□□□ 0.03
PRPF40B-216ENST00000552301 TRBV5-7A0A0A0MS05 114 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 M0R1W7 72 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 SH2D1BO14796 132 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 TGFBR2P37173 567 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 MTNR1BP49286 362 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 EDDM3BP56851 147 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 SRSF2Q01130 221 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 DOC2BQ14184 412 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 ZNF146Q15072 292 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 BRD3OSQ6XYD6 125 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 OR8H2Q8N162 312 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 DERL3Q96Q80 235 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 SEBOXQ9HB31 216 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 SIRT7Q9NRC8 400 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 C19orf12Q9NSK7 152 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 FOXJ3Q9UPW0 622 aa15.22■□□□□ 0.03
PRPF40B-216ENST00000552301 SIRPB1O00241 398 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 ZNF737O75373 536 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 ZNF44P15621 663 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 IGFBP3P17936 291 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 HILS1P60008 231 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 GPR50Q13585 617 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 EDDM3AQ14507 147 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 GRK1Q15835 563 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 CRIP3Q6Q6R5 217 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 JAGN1Q8N5M9 183 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 OR4M1Q8NGD0 313 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 METTL8Q9H825 291 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 NOX4Q9NPH5 578 aa15.21■□□□□ 0.03
PRPF40B-216ENST00000552301 SVEP1Q4LDE5 3571 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 TRAV8-7A0A075B6U6 113 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 hCG_1809904A0A1W2PP81 198 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 A0A1W2PPE2 198 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 A0A1W2PR64 198 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 A0A1W2PRV1 198 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 DENRO43583 198 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 GPX5O75715 221 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 MAS1P04201 325 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 PTGFRP43088 359 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 MAP2K4P45985 399 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 OR3A4PP47883 348 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 GABARAPL2P60520 117 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 GUCA2AQ02747 115 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 SCN1BQ07699 218 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 MLLT11Q13015 90 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms