RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CST1P01037 141 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 LMO1P25800 156 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 SLC6A1P30531 599 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 CEACAM3P40198 252 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 DGCR2P98153 550 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 SNAPC1Q16533 368 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 ZNF322Q6U7Q0 402 aaPredicted RBP11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 C10orf99Q6UWK7 81 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 Q8IYB0 196 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 ARHGAP24Q8N264 748 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 EMG1Q92979 244 aaKnown RBP11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 SLAMF9Q96A28 289 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 CHST6Q9GZX3 395 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 SEBOXQ9HB31 216 aaPredicted RBP11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 COPS3Q9UNS2 423 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 U3KQK5 164 aa11.29□□□□□ -0.6
CHMP1A-210ENST00000551981 A0A1B0GTI1 187 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 MGST3O14880 152 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 SRSF10O75494 262 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 GATBO75879 557 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 INMTO95050 263 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 IGHA1P01876 353 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 CCDC159P0C7I6 412 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 MNDAP41218 407 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 THBS3P49746 956 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 FUT6P51993 359 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 TRIM25Q14258 630 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 ETV3LQ6ZN32 361 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 SLC25A26Q70HW3 274 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 LRGUKQ96M69 825 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 MNTQ99583 582 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 MED4Q9NPJ6 270 aa11.28□□□□□ -0.6
CHMP1A-210ENST00000551981 TRGV10A0A0A0MS01 117 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 FUOMA2VDF0 154 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 CCDC182A6NF36 153 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 NUDT19A8MXV4 375 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 TOR1AO14656 332 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 MMP23AO75900 390 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 CYB5AP00167 134 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 AMY1AP04745 511 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 AMY2AP04746 511 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 ERP29P30040 261 aaKnown RBP11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 P2RX3P56373 397 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 CXCR4P61073 352 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 KLHL22Q53GT1 634 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 PRAMEF5Q5TYX0 476 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 TMEM236Q5W0B7 351 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 Q6ZSR3 168 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 OR52N4Q8NGI2 321 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 BORCS8Q96FH0 119 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 APOL4Q9BPW4 351 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF446Q9NWS9 450 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 HSPE1-MOB4S4R3N1 261 aa11.27□□□□□ -0.61
CHMP1A-210ENST00000551981 RYR2Q92736 4967 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 OOSP1A8MZH6 123 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF670-ZNF695F2Z2N8 137 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 C3orf84H3BNL1 204 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 PSPNO60542 156 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 RAMP3O60896 148 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 DCTN3O75935 186 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 SERPINA3P01011 423 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 ANXA8P13928 327 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 CCL1P22362 96 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 CDK2P24941 298 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 MYCNOSP40205 109 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 GP2P55259 537 aaKnown RBP11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 ZNF91Q05481 1191 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 UBE2V2Q15819 145 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 SPIN3Q5JUX0 258 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 TPTE2P1Q5T6R2 138 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 HEPN1Q6WQI6 88 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 PLEKHG7Q6ZR37 379 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 OR2W3Q7Z3T1 314 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 TMEM179BQ7Z7N9 219 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 SLC35F2Q8IXU6 374 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 CHPT1Q8WUD6 406 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 ZFP57Q9NU63 452 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 HHLA2Q9UM44 414 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 KIAA2026Q5HYC2 2103 aa11.26□□□□□ -0.61
CHMP1A-210ENST00000551981 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 H0YHG0 523 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 MAGEB4O15481 346 aaPredicted RBP11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 SYT7O43581 403 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 HOXB6P17509 224 aaKnown RBP11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 CD34P28906 385 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 OR3A1P47881 315 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 OR3A4PP47883 348 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 PRRX1P54821 245 aa11.25□□□□□ -0.61
CHMP1A-210ENST00000551981 CDC42P60953 191 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms