RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
CACNB3-216ENST00000550391 NICN1Q9BSH3 213 aa11.88□□□□□ -0.51
CACNB3-216ENST00000550391 WDR12Q9GZL7 423 aaKnown RBP11.88□□□□□ -0.51
CACNB3-216ENST00000550391 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
CACNB3-216ENST00000550391 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
CACNB3-216ENST00000550391 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 A0A0A6YYD4 124 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A18PA6NE21 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A16PA6NEW6 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A20PA6NIJ5 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A8PA6NJQ4 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A22PA8MWA6 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A12PA8MX19 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A5PA8MXJ8 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 H3BUI4 141 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 RAB27BO00194 218 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 LHBP01229 141 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A15PP0C7V4 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A13PP0C7W8 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A14PP0C7W9 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A24PP0C7X0 464 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 GLRA1P23415 457 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 KRTAP10-9P60411 292 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 IL13RA2Q14627 380 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 SMIM21Q3B7S5 101 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 PIGYQ3MUY2 71 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 LINC00596Q86U02 117 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 OR10R2Q8NGX6 335 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 C15orf40Q8WUR7 153 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 TREM2Q9NZC2 230 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 NPTNQ9Y639 398 aa11.87□□□□□ -0.51
CACNB3-216ENST00000550391 TRAV18A0A075B6X5 111 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 IGHV1-69-2A0A0G2JMI3 117 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 OVOL3O00110 214 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
CACNB3-216ENST00000550391 WNT9BO14905 357 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 SOCS1O15524 211 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 KNG1P01042 644 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 EGR1P18146 543 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 GABRR1P24046 479 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 BLVRBP30043 206 aaPredicted RBP11.86□□□□□ -0.51
CACNB3-216ENST00000550391 RBMXP38159 391 aaKnown RBP11.86□□□□□ -0.51
CACNB3-216ENST00000550391 MNDAP41218 407 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 GMFBP60983 142 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 MRPS11P82912 194 aaKnown RBP11.86□□□□□ -0.51
CACNB3-216ENST00000550391 PITPNAQ00169 270 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 IL18Q14116 193 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 ZNF146Q15072 292 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 TAF9Q16594 264 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 MPV17LQ2QL34 196 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 MOGAT2Q3SYC2 334 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 PYHIN1Q6K0P9 492 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 FAM90A1Q86YD7 464 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 TGIF2LYQ8IUE0 185 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 IZUMO1Q8IYV9 350 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 C1orf87Q8N0U7 546 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 BOLLQ8N9W6 283 aaKnown RBP11.86□□□□□ -0.51
CACNB3-216ENST00000550391 CHST4Q8NCG5 386 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 RAB3CQ96E17 227 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 GLS2Q9UI32 602 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 MRPS7Q9Y2R9 242 aaKnown RBP11.86□□□□□ -0.51
CACNB3-216ENST00000550391 V9GYH0 126 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
CACNB3-216ENST00000550391 A0A0G2JMP0 313 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 A0A0X1KG70 313 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-216ENST00000550391 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-216ENST00000550391 SH2D1BO14796 132 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-216ENST00000550391 FOSL1P15407 271 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 CDKN1AP38936 164 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 PTH2RP49190 550 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
CACNB3-216ENST00000550391 TAS2R20P59543 309 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 HOXA4Q00056 320 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-216ENST00000550391 MADCAM1Q13477 382 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 HFEQ30201 348 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 PYDC2Q56P42 97 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 OR4M2Q8NGB6 313 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 CCL17Q92583 94 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 RDH5Q92781 318 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 NEDD4LQ96PU5 975 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 CCL19Q99731 98 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 WDR13Q9H1Z4 485 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 DLL4Q9NR61 685 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 IL36RNQ9UBH0 155 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 DNAJB11Q9UBS4 358 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 CACNG2Q9Y698 323 aa11.85□□□□□ -0.51
CACNB3-216ENST00000550391 TMEM178BH3BS89 294 aa11.84□□□□□ -0.51
CACNB3-216ENST00000550391 DEGS1O15121 323 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms