RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SEBOXQ9HB31 216 aaPredicted RBP10.77□□□□□ -0.69
CPSF6-204ENST00000547486 RAB18Q9NP72 206 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 NOTCH1P46531 2555 aa10.77□□□□□ -0.69
CPSF6-204ENST00000547486 TGP01266 2768 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 IGKV1-12A0A0C4DH73 117 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 DAPL1A0PJW8 107 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 EI24O14681 340 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 SLC16A6O15403 523 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 CIB2O75838 187 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 MMP23AO75900 390 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 IGKV1D-12P01611 117 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 RBP4P02753 201 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 ISG15P05161 165 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 VSIG10L2P0DP72 767 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 GABRR1P24046 479 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 AZGP1P25311 298 aaKnown RBP10.76□□□□□ -0.69
CPSF6-204ENST00000547486 POU3F4P49335 361 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 ATP1B3P54709 279 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 SNU13P55769 128 aaKnown RBP10.76□□□□□ -0.69
CPSF6-204ENST00000547486 SNRPGP62308 76 aaKnown RBP10.76□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF91Q05481 1191 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 PDZK1IP1Q13113 114 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 DYNC1I2Q13409 638 aaKnown RBP10.76□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF146Q15072 292 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 CNN3Q15417 329 aaKnown RBP10.76□□□□□ -0.69
CPSF6-204ENST00000547486 GRK1Q15835 563 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 TMEM244Q5VVB8 128 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 FDX2Q6P4F2 183 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 LIAT1Q6ZQX7 453 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 Q6ZS46 218 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 FAM220AQ7Z4H9 259 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 KCTD20Q7Z5Y7 419 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 FAM58AQ8N1B3 248 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 OR51A4Q8NGJ6 313 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 RFT1Q96AA3 541 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF714Q96N38 554 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 MBOAT4Q96T53 435 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 NPFFR1Q9GZQ6 430 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 SERTAD4Q9NUC0 356 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 IMPAD1Q9NX62 359 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
CPSF6-204ENST00000547486 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
CPSF6-204ENST00000547486 TRBV2A0A0J9YWF9 115 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 hADV38S2A0JD32 116 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 OR4C45A6NMZ5 311 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 J3QLW9 94 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF19P17023 458 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 PRKACAP17612 351 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 PEX2P28328 305 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 OR3A1P47881 315 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 ACTA2P62736 377 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 ACTG2P63267 376 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 ACTC1P68032 377 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 ACTA1P68133 377 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 KPNB1Q14974 876 aaKnown RBP10.75□□□□□ -0.69
CPSF6-204ENST00000547486 C11orf88Q6PI97 169 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 BAIAP2L2Q6UXY1 529 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 UTS2BQ765I0 119 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 Q8IYB0 196 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 ENTHD1Q8IYW4 607 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 LYG1Q8N1E2 194 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 Q8N2B8 174 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 PELI1Q96FA3 418 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 SPACA5Q96QH8 159 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 HMG20AQ9NP66 347 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 EXOGQ9Y2C4 368 aaKnown RBP10.75□□□□□ -0.69
CPSF6-204ENST00000547486 HILPDAQ9Y5L2 63 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 SESN1Q9Y6P5 492 aa10.75□□□□□ -0.69
CPSF6-204ENST00000547486 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
CPSF6-204ENST00000547486 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 CD28P10747 220 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF20P17024 532 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 GABRB1P18505 474 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 PRKACBP22694 351 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 ALDH3A2P51648 485 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 CCR9P51686 369 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 BLCAPP62952 87 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 MEDAGQ5VYS4 303 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 LHFPL2Q6ZUX7 228 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 CBR4Q8N4T8 237 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 ACBD7Q8N6N7 88 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 ZNF676Q8N7Q3 588 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 FOXRED1Q96CU9 486 aaPredicted RBP10.74□□□□□ -0.69
CPSF6-204ENST00000547486 LGALS12Q96DT0 336 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 OPALINQ96PE5 141 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 CDCA4Q9BXL8 241 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 TMEM133Q9H2Q1 129 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 ISG20L2Q9H9L3 353 aaKnown RBP10.74□□□□□ -0.69
CPSF6-204ENST00000547486 LINC00312Q9Y6C7 94 aa10.74□□□□□ -0.69
CPSF6-204ENST00000547486 E9PI62 339 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 G3V4G9 280 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 SIRPB1O00241 398 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 MGST3O14880 152 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OR2H2O95918 312 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 CYB5AP00167 134 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 MT-ND2P03891 347 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OPN1MWP04001 364 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 HTR1AP08908 422 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OPN1MW2P0DN77 364 aa10.73□□□□□ -0.69
CPSF6-204ENST00000547486 OPN1MW3P0DN78 364 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms