RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 RTL8AQ9BWD3 113 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 KRTAP4-5Q9BYR2 181 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 RPRD1BQ9NQG5 326 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 MRPL22Q9NWU5 206 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 TVP23BQ9NYZ1 205 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 OR6C68A6NDL8 312 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 LINC01548A6NM66 108 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 SERPINE3A8MV23 424 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 MTRF1O75570 445 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 HLA-DQA2P01906 255 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF728P0DKX0 622 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 FMO3P31513 532 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 GSK3AP49840 483 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 TMED1Q13445 227 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 CRMP1Q14194 572 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 FAM76BQ5HYJ3 339 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 LCN1P1Q5VSP4 162 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 MEDAGQ5VYS4 303 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 LPCAT4Q643R3 524 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 CALHM1Q8IU99 346 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 GID4Q8IVV7 300 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 DHRSXQ8N5I4 330 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 IQCF1Q8N6M8 205 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 SETD9Q8NE22 299 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 PROKR2Q8NFJ6 384 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 RNF170Q96K19 258 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 Q96MT0 163 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 NMNAT2Q9BZQ4 307 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 KIAA1456Q9P272 454 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 GMPPBQ9Y5P6 360 aa12.01□□□□□ -0.49
CLSTN3-216ENST00000545663 PKHD1P08F94 4074 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 HERC1Q15751 4861 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 IGHV2-26A0A0B4J1V2 119 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 LOC100130705A0A1B0GUX0 176 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 hCG_38984A0A1B0GV85 526 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 XRCC2O43543 280 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 PRDX2P32119 198 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 BRS3P32247 399 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 INSL3P51460 131 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 PRDX4Q13162 271 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 TMEM236Q5W0B7 351 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 OR4P4Q8NGL7 312 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 IL17DQ8TAD2 202 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 TMEM163Q8TC26 289 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF488Q96MN9 340 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 SPATA25Q9BR10 227 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 OPA3Q9H6K4 179 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 RETNQ9HD89 108 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 C19orf73Q9NVV2 129 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 FAM118AQ9NWS6 357 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 HHLA2Q9UM44 414 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 HSPE1-MOB4S4R3N1 261 aa12□□□□□ -0.49
CLSTN3-216ENST00000545663 ANXA2P2A6NMY6 339 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 SPI1P17947 270 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 HTR1DP28221 377 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 VHLP40337 213 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 SNRPGP62308 76 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 FHL3Q13643 280 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 TIGD6Q17RP2 521 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 GFOD2Q3B7J2 385 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 ZIK1Q3SY52 487 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 SLC25A30Q5SVS4 291 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 NXNL2Q5VZ03 156 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 CPOQ8IVL8 374 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 Q8N1Y9 231 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 HPSE2Q8WWQ2 592 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 OTULINQ96BN8 352 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 COPS4Q9BT78 406 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF319Q9P2F9 582 aa11.99□□□□□ -0.49
CLSTN3-216ENST00000545663 TMEM210A6NLX4 147 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 H3BSH0 61 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 SLC1A7O00341 560 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 TK1P04183 234 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 EPHA2P29317 976 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 POLR2IP36954 125 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 CDX1P47902 265 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 GPM6AP51674 278 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 SLC35B1P78383 322 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 EFNB1P98172 346 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 HAGHQ16775 308 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 LYPD4Q6UWN0 246 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 BAIAP2L2Q6UXY1 529 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 ZNF561Q8N587 486 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 COMMD1Q8N668 190 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 TCEANCQ8N8B7 351 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 MBOAT4Q96T53 435 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 MYCBPQ99417 103 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 ADI1Q9BV57 179 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 ISYNA1Q9NPH2 558 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 CENPMQ9NSP4 180 aa11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLSTN3-216ENST00000545663 TVP23AA6NH52 213 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 M0QZK8 103 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 PRKYO43930 277 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 MMP23AO75900 390 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 IFNA6P05013 189 aa11.97□□□□□ -0.49
CLSTN3-216ENST00000545663 ACKR3P25106 362 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms