RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PLA1AQ53H76 456 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 ZFP1Q6P2D0 407 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 LHFPL2Q6ZUX7 228 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 OR4C13Q8NGP0 309 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 RFT1Q96AA3 541 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 FGGYQ96C11 551 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 PELI1Q96FA3 418 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 C4orf36Q96KX1 117 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 ZNF714Q96N38 554 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 OPALINQ96PE5 141 aa17.09■□□□□ 0.33
SCARB1-210ENST00000545493 RANBP3Q9H6Z4 567 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-210ENST00000545493 TBL2Q9Y4P3 447 aaKnown RBP17.09■□□□□ 0.33
SCARB1-210ENST00000545493 OR4C45A6NMZ5 311 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 VGLL3A8MV65 326 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 ARG1P05089 322 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 CALCBP10092 127 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 DUSP1P28562 367 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 CCR9P51686 369 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 SNU13P55769 128 aaKnown RBP17.08■□□□□ 0.32
SCARB1-210ENST00000545493 LGALS4P56470 323 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 ZNF146Q15072 292 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 GRK1Q15835 563 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 HIST2H2BDQ6DRA6 164 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 LIAT1Q6ZQX7 453 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 KCTD20Q7Z5Y7 419 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 ENTHD1Q8IYW4 607 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 FAM58AQ8N1B3 248 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 OR11H6Q8NGC7 330 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 OR13D1Q8NGV5 346 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 SPSB1Q96BD6 273 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 FOXRED1Q96CU9 486 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-210ENST00000545493 SEBOXQ9HB31 216 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-210ENST00000545493 RAB18Q9NP72 206 aa17.08■□□□□ 0.32
SCARB1-210ENST00000545493 IGKV1-12A0A0C4DH73 117 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 IGKV1D-12P01611 117 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 DBTP11182 482 aaKnown RBP17.07■□□□□ 0.32
SCARB1-210ENST00000545493 PRKACAP17612 351 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 GABRR1P24046 479 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 KIR2DS4P43632 304 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 OR3A1P47881 315 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 MTCP1P56278 107 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 ACTA2P62736 377 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 ACTG2P63267 376 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 MEF2CQ06413 473 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-210ENST00000545493 C2orf68Q2NKX9 166 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 ACBD7Q8N6N7 88 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 OR4S1Q8NGB4 309 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 OR13C9Q8NGT0 318 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 SPACA5Q96QH8 159 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 ALG8Q9BVK2 526 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 HHLA2Q9UM44 414 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 FOXJ3Q9UPW0 622 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 TCF19Q9Y242 345 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 GMPPBQ9Y5P6 360 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 LINC00312Q9Y6C7 94 aa17.07■□□□□ 0.32
SCARB1-210ENST00000545493 hADV38S2A0JD32 116 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 J3QLW9 94 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 ZNF19P17023 458 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 PRKACBP22694 351 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 PEX2P28328 305 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 PDZK1IP1Q13113 114 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 ALKBH1Q13686 389 aaKnown RBP17.06■□□□□ 0.32
SCARB1-210ENST00000545493 HERPUD1Q15011 391 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 SPIN3Q5JUX0 258 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 CCBE1Q6UXH8 406 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-210ENST00000545493 KLHDC1Q8N7A1 406 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 OR13C3Q8NGS6 347 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 ZNF649Q9BS31 505 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 ZNF702PQ9H963 129 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 MYRFQ9Y2G1 1151 aa17.06■□□□□ 0.32
SCARB1-210ENST00000545493 SIRPB1O00241 398 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 CYB5AP00167 134 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 FAM189A2Q15884 450 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 CCDC121Q6ZUS5 278 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 OR5D18Q8NGL1 313 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 NPFFR1Q9GZQ6 430 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 ISG20L2Q9H9L3 353 aaKnown RBP17.05■□□□□ 0.32
SCARB1-210ENST00000545493 HMG20AQ9NP66 347 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 SESN1Q9Y6P5 492 aa17.05■□□□□ 0.32
SCARB1-210ENST00000545493 TGP01266 2768 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 IGHV2-26A0A0B4J1V2 119 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 SNTNA6NMZ2 147 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 KDM4BO94953 1096 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 MT-ND2P03891 347 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 JUNBP17275 347 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-210ENST00000545493 RAB13P51153 203 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 P2RX3P56373 397 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 GALEQ14376 348 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 SSX2Q16385 188 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 LHFPL3Q86UP9 236 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 TMEM219Q86XT9 240 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 SYS1Q8N2H4 156 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 ZNF676Q8N7Q3 588 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 OR2T6Q8NHC8 308 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 FAM110DQ8TAY7 271 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-210ENST00000545493 APH1BQ8WW43 257 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 SLC29A1Q99808 456 aa17.04■□□□□ 0.32
SCARB1-210ENST00000545493 A6NDX4 124 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 MGST3O14880 152 aa17.03■□□□□ 0.32
SCARB1-210ENST00000545493 MMP23AO75900 390 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms