RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 SOSTQ9BQB4 213 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 RTL8AQ9BWD3 113 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 OR2J1Q9GZK6 312 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 CST11Q9H112 138 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 TLNRD1Q9H1K6 362 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 RNF167Q9H6Y7 350 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 SMURF1Q9HCE7 757 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 TMEM100Q9NV29 134 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 TAS2R4Q9NYW5 299 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 RAB22AQ9UL26 194 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 POLDIP2Q9Y2S7 368 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 RHBDD3Q9Y3P4 386 aa5.56□□□□□ -1.52
CDCA3-209ENST00000544610 YLPM1P49750 1951 aaKnown RBP5.56□□□□□ -1.52
CDCA3-209ENST00000544610 PLSCR5A0PG75 271 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 C5orf63A6NC05 138 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 TMEM14DPA8MWL7 114 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CTDSPLO15194 276 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CA11O75493 328 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CYB5AP00167 134 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 MAS1P04201 325 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 GLAP06280 429 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CCL2P13500 99 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 DAOP14920 347 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ARSBP15848 533 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CD200P41217 278 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 MMP15P51511 669 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PPP5CP53041 499 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 MTCP1P56278 107 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ZP1P60852 638 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 QRFPP83859 136 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PITPNAQ00169 270 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 SSBP1Q04837 148 aaKnown RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 MXD1Q05195 221 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PRDX4Q13162 271 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ZNF846Q147U1 533 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ODF4Q2M2E3 257 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ZNF181Q2M3W8 571 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PCGF3Q3KNV8 242 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 FAM90A1Q86YD7 464 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 FAM89BQ8N5H3 189 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 GDPD1Q8N9F7 314 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 LINC01356Q8N9X3 169 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 OR52N4Q8NGI2 321 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 OR51A2Q8NGJ7 313 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 OR13C9Q8NGT0 318 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 OR10Z1Q8NGY1 313 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ZNF671Q8TAW3 534 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 NEU4Q8WWR8 484 aaPredicted RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 S100A16Q96FQ6 103 aaKnown RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 URM1Q9BTM9 101 aaKnown RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 CCDC32Q9BV29 185 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PAPOLGQ9BWT3 736 aaKnown RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 TM2D1Q9BX74 207 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 C6orf62Q9GZU0 229 aaPredicted RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 RAB1BQ9H0U4 201 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 MS4A5Q9H3V2 200 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PLGRKTQ9HBL7 147 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 AKIP1Q9NQ31 210 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 PTTG3PQ9NZH4 202 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 ZNF107Q9UII5 783 aaPredicted RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 DAPK2Q9UIK4 370 aa5.55□□□□□ -1.52
CDCA3-209ENST00000544610 AK6Q9Y3D8 172 aaKnown RBP5.55□□□□□ -1.52
CDCA3-209ENST00000544610 A0A1W2PPK0 400 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 ISPDA4D126 451 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 J3QT63 122 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 SULT1C2O00338 296 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 XRCC3O43542 346 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 TIMM8AO60220 97 aaPredicted RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 KDM4BO94953 1096 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 HCKP08631 526 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 CLEC2LP0C7M8 214 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 ANOS1P23352 680 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 TNFSF4P23510 183 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 CPT2P23786 658 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 TNFSF8P32971 234 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 TGFBR1P36897 503 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 SRP14P37108 136 aaKnown RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 POU3F4P49335 361 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 SRP9P49458 86 aaKnown RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 DVL1P1P54792 670 aaPredicted RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 OR10A3P58181 314 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 MRPS11P82912 194 aaKnown RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 PDZK1IP1Q13113 114 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 HLXQ14774 488 aaPredicted RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 IDNKQ5T6J7 187 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 PLCXD3Q63HM9 321 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 PYHIN1Q6K0P9 492 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 ANGPTL5Q86XS5 388 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 JAGN1Q8N5M9 183 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 OR51T1Q8NGJ9 327 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 TRMT10AQ8TBZ6 339 aaKnown RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 Q8TCH9 128 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 HPSE2Q8WWQ2 592 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 PIGCQ92535 297 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 GTF3AQ92664 365 aaKnown RBP5.54□□□□□ -1.52
CDCA3-209ENST00000544610 BORCS5Q969J3 196 aa5.54□□□□□ -1.52
CDCA3-209ENST00000544610 PHF21AQ96BD5 680 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms