RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 BEND4Q6ZU67 534 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 MOB3CQ70IA8 216 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 CXorf67Q86X51 503 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-209ENST00000544349 FAM219AQ8IW50 185 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 FAM89BQ8N5H3 189 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 WDR31Q8NA23 367 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 OR56B2PQ8NGI1 322 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 BORCS8Q96FH0 119 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 CPNE2Q96FN4 548 aaPredicted RBP12.3□□□□□ -0.44
VPS33A-209ENST00000544349 FAHD2AQ96GK7 314 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 TECTBQ96PL2 329 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 OPA3Q9H6K4 179 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 COMMD9Q9P000 198 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 PTPRQQ9UMZ3 2332 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 DMXL2Q8TDJ6 3036 aa12.3□□□□□ -0.44
VPS33A-209ENST00000544349 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 A8MXK9 166 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 FGF2P09038 288 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 CBR1P16152 277 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 AMY2BP19961 511 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 HOXC12P31275 282 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 CEACAM8P31997 349 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 RBP2P50120 134 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 PNLIPRP3Q17RR3 467 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 OR5L1Q8NGL2 311 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 SNRNP40Q96DI7 357 aaKnown RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 S100A13Q99584 98 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 PECRQ9BY49 303 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 MS4A7Q9GZW8 240 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 ZNF581Q9P0T4 197 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 SLC7A11Q9UPY5 501 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 IGKV1D-8A0A087WSZ0 117 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 A0A0D9SG52 128 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 ZNF850A8MQ14 1090 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 B8ZZF3 427 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 FUT6P51993 359 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 SUPT4H1P63272 117 aaKnown RBP12.29□□□□□ -0.44
VPS33A-209ENST00000544349 SLC9A3R2Q15599 337 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 FAM189A2Q15884 450 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 AADACL3Q5VUY0 350 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 PLCXD3Q63HM9 321 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 OVCH2Q7RTZ1 564 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 PDZD9Q8IXQ8 264 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 C17orf78Q8N4C9 275 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 OR5H2Q8NGV7 314 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 ST6GALNAC5Q9BVH7 336 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 PFDN2Q9UHV9 154 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 TUBD1Q9UJT1 453 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 GPR132Q9UNW8 380 aa12.29□□□□□ -0.44
VPS33A-209ENST00000544349 KANTRA0A1W2PQU2 76 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 MPTX1A8MV57 137 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 J3QW42 95 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 PRRG2O14669 202 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ADAP1O75689 374 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 OR2F2O95006 317 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 IGKV3-15P01624 115 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 MRPL49Q13405 166 aaKnown RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 OR2F1Q13607 317 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 PEG10Q86TG7 708 aaKnown RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ARRDC1Q8N5I2 433 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 BVESQ8NE79 360 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 CSNK2A3Q8NEV1 391 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 CDH20Q9HBT6 801 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 RASL12Q9NYN1 266 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ANKRD11Q6UB99 2663 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 CEACAM18A8MTB9 384 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 SIGLEC5O15389 551 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 CST4P01036 141 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 TMEM225BP0DP42 221 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 GLI4P10075 376 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 M6PRP20645 277 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 SNU13P55769 128 aaKnown RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 TAS2R31P59538 309 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ACTBL2Q562R1 376 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 CLEC18BQ6UXF7 455 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 GFRALQ6UXV0 394 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 SFXN3Q9BWM7 321 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 PAPOLGQ9BWT3 736 aaKnown RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ELL3Q9HB65 397 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 BARX1Q9HBU1 254 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
VPS33A-209ENST00000544349 ASF1BQ9NVP2 202 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms