RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 FAM221AA4D161 298 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 ANKRD30BLA7E2S9 258 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 IFNA7P01567 189 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 CTSDP07339 412 aaPredicted RBP12.11□□□□□ -0.47
LDB3-207ENST00000542786 ECI1P42126 302 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
LDB3-207ENST00000542786 ARPC4P59998 168 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 PPP1CBP62140 327 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 SPATA46Q5T0L3 261 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 WDR86Q86TI4 376 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 DHRS9Q9BPW9 319 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 ZNF2Q9BSG1 426 aaPredicted RBP12.11□□□□□ -0.47
LDB3-207ENST00000542786 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
LDB3-207ENST00000542786 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 OR51I2Q9H344 312 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 PLSCR4Q9NRQ2 329 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
LDB3-207ENST00000542786 CELSR3Q9NYQ7 3312 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 K7EM74 188 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 OR7C1O76099 320 aaPredicted RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 NAPSAO96009 420 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 CBR1P16152 277 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 SERPINF1P36955 418 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 GMFBP60983 142 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 GNG3P63215 75 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 FGL1Q08830 312 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 IL24Q13007 206 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 SLC9A3R2Q15599 337 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 RBMXL3Q8N7X1 1067 aaKnown RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 CNEP1R1Q8N9A8 125 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 PPP1R1CQ8WVI7 109 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 EXTL1Q92935 676 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 PKIBQ9C010 78 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 RAB18Q9NP72 206 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 PRR13Q9NZ81 148 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 RNF222A6NCQ9 220 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 NOS1APO75052 506 aaPredicted RBP12.1□□□□□ -0.47
LDB3-207ENST00000542786 B3GALNT1O75752 331 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 CA6P23280 308 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 IL15RAQ13261 267 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
LDB3-207ENST00000542786 MPV17LQ2QL34 196 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 C11orf87Q6NUJ2 197 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 SLC22A25Q6T423 547 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
LDB3-207ENST00000542786 TRBV6-7A0A0A0MS04 114 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 CRHP06850 196 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 PGAM2P15259 253 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 CALCRP30988 508 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
LDB3-207ENST00000542786 ALKBH6Q3KRA9 238 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 HAGHLQ6PII5 290 aaPredicted RBP12.09□□□□□ -0.47
LDB3-207ENST00000542786 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 ZNF573Q86YE8 665 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 OR2J1Q9GZK6 312 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 CDH20Q9HBT6 801 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 AKAP13Q12802 2813 aa12.09□□□□□ -0.47
LDB3-207ENST00000542786 CRYM-AS1A6NIL9 109 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 J3QT63 122 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 KLK10O43240 276 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ADAP1O75689 374 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ZNF205O95201 554 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 IGLV1-44P01699 117 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 RAC2P15153 192 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 IL32P24001 234 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ZNF345Q14585 488 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 NMES1Q9C002 83 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ARL6Q9H0F7 186 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 IFT22Q9H7X7 185 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ZNF71Q9NQZ8 489 aaPredicted RBP12.08□□□□□ -0.48
LDB3-207ENST00000542786 RDH8Q9NYR8 311 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 MAB21L2Q9Y586 359 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms