RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TVP23AA6NH52 213 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 LYNX1G3V0Z9 82 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 G3V2T6 193 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM178BH3BS89 294 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 DCTN6O00399 190 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 MAGEB3O15480 346 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 XRCC3O43542 346 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 GPR137BO60478 399 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 LMX1BO60663 402 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CRLF1O75462 422 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 GLCEO94923 617 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CRYZL1O95825 349 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 IGHV1-46P01743 117 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CD55P08174 381 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 IGFBP1P08833 259 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 IGHV4-31P0DP07 118 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 LYNX1P0DP58 116 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SPI1P17947 270 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 PYCR1P32322 319 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 MC5RP33032 325 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 GGT2P36268 569 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 MPV17P39210 176 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CAPGP40121 348 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SRP9P49458 86 aaKnown RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 MMP15P51511 669 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 GRB2P62993 217 aaKnown RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TNFAIP6P98066 277 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CDK5Q00535 292 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF45Q02386 682 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 MZT1Q08AG7 82 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CRMP1Q14194 572 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 GINS1Q14691 196 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 MEP1BQ16820 701 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TEX30Q5JUR7 227 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SLC35D3Q5M8T2 416 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 C6orf52Q5T4I8 152 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TTC23Q5W5X9 447 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TEX38Q6PEX7 206 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 DRAM2Q6UX65 266 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 FBXW12Q6X9E4 464 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 RFPL4BQ6ZWI9 263 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 PGAP1Q75T13 922 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CENPVQ7Z7K6 275 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 DHRSXQ8N5I4 330 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TEX29Q8N6K0 151 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 ASCC1Q8N9N2 400 aaKnown RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 OR2Z1Q8NG97 314 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 OR8D4Q8NGM9 314 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 OR9Q1Q8NGQ5 310 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 OR6K6Q8NGW6 343 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 OR4Q3Q8NH05 313 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 NUDCD2Q8WVJ2 157 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SLC7A6Q92536 515 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CCL17Q92583 94 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 RAB39BQ96DA2 213 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CENPNQ96H22 339 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF486Q96H40 463 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 INTS14Q96SY0 518 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 COPS4Q9BT78 406 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 RBM4Q9BWF3 364 aaKnown RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 BEX2Q9BXY8 128 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 PLA2G12AQ9BZM1 189 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SLC22A4Q9H015 551 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SHARPINQ9H0F6 387 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 OR51V1Q9H2C8 321 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 HIPK2Q9H2X6 1198 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 FN3KQ9H479 309 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF275Q9NSD4 429 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 CENPMQ9NSP4 180 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM100Q9NV29 134 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 PAK1IP1Q9NWT1 392 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-220ENST00000541963 VNN3Q9NY84 501 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 PTTG3PQ9NZH4 202 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 IL19Q9UHD0 177 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.5□□□□□ -1.695e-8■■■■■ 34.6
CPSF7-220ENST00000541963 PCDHGB1Q9Y5G3 927 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 SNX5Q9Y5X3 404 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 ITPR3Q14573 2671 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 A0A096LNT2 108 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 LRP5LA4QPB2 252 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 GGT3PA6NGU5 568 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 LRRC30A6NM36 301 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 B4DSR2 109 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF878C9JN71 531 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 M0R135 149 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 GYPBP06028 91 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ACSM4P0C7M7 580 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 IRF2P14316 349 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 PRKACGP22612 351 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CFL1P23528 166 aaKnown RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 HSD11B1P28845 292 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 DDOSTP39656 456 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 AP2S1P53680 142 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CRISP1P54107 249 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 DVL1P1P54792 670 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CSNK2BP67870 215 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 RELQ04864 619 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 SCGB2A2Q13296 93 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms