RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 OCSTAMPQ9BR26 566 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 SLC7A11Q9UPY5 501 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 AADACP22760 399 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 CALCRP30988 508 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 THBS4P35443 961 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 CAMLGP49069 296 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 POLR2GP62487 172 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTPN1-202ENST00000541713 RAC1P63000 192 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 PPA1Q15181 289 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 PMS2CLQ68D20 193 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 OR6S1Q8NH40 331 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 DEFB127Q9H1M4 99 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 SLC7A10Q9NS82 523 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 FIGNL2A6NMB9 653 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
PTPN1-202ENST00000541713 H3F3AP84243 136 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 ZNF345Q14585 488 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 MIDNQ504T8 468 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 VAX1Q5SQQ9 334 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 OR10Z1Q8NGY1 313 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 OIT3Q8WWZ8 545 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 C14orf79Q96F83 325 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 SCGB3A2Q96PL1 93 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 MEMO1Q9Y316 297 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 SCGNO76038 276 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 SCTP09683 121 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 CYB561P49447 251 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 ZNF529Q6P280 563 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 TMPRSS7Q7RTY8 843 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 OSR2Q8N2R0 312 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 POC1AQ8NBT0 407 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 PRRX2Q99811 253 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 RSRP1Q9BUV0 290 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 NMES1Q9C002 83 aa11.74□□□□□ -0.53
PTPN1-202ENST00000541713 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 SSSCA1O60232 199 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 TFF1P04155 84 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 FCGR3AP08637 254 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 BCL3P20749 454 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 MAGEA5P43359 124 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 MALLQ13021 153 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 ZFP62Q8NB50 900 aaPredicted RBP11.73□□□□□ -0.53
PTPN1-202ENST00000541713 PP6455Q8WZ26 134 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 SIGLEC12Q96PQ1 595 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 SLC5A7Q9GZV3 580 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 SLC2A9Q9NRM0 540 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 LPAR3Q9UBY5 353 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPN1-202ENST00000541713 OR2B8PP59922 312 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
PTPN1-202ENST00000541713 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
PTPN1-202ENST00000541713 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
PTPN1-202ENST00000541713 SGCZQ96LD1 299 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 ANGPTL4Q9BY76 406 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 ARRDC1-AS1Q9H2J1 176 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 TMEM38BQ9NVV0 291 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 SEMA5BQ9P283 1151 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 TCFL5Q9UL49 500 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 LILRA1O75019 489 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 TPPPO94811 219 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 PRF1P14222 555 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 RPS2P15880 293 aaKnown RBP11.73□□□□□ -0.53
PTPN1-202ENST00000541713 ZXDAP98168 799 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 Q96M66 194 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 TP53RKQ96S44 253 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 WNT5BQ9H1J7 359 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 LOXL2Q9Y4K0 774 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 URGCP-MRPS24S4R325 110 aa11.73□□□□□ -0.53
PTPN1-202ENST00000541713 PCNX2A6NKB5 2137 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 SMG1Q96Q15 3661 aaKnown RBP11.72□□□□□ -0.53
PTPN1-202ENST00000541713 SERPINE3A8MV23 424 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 FBP1P09467 338 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 RD3LP0DJH9 198 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 SPP1P10451 314 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 RUNX1Q01196 453 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 STK11Q15831 433 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 HIST3H3Q16695 136 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 CT55Q8WUE5 264 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 TECTAO75443 2155 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 NKX2-6A6NCS4 301 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 CRYBA1P05813 215 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 FAM157CP0CG43 387 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 GLP1RP43220 463 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 F2RL1P55085 397 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 MLF1P58340 268 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 FAM3AP98173 230 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 PJVKQ0ZLH3 352 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 CXorf66Q5JRM2 361 aaPredicted RBP11.72□□□□□ -0.53
PTPN1-202ENST00000541713 FAM27BQ5VT28 67 aa11.72□□□□□ -0.53
PTPN1-202ENST00000541713 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms