RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 GPR87Q9BY21 358 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 TMEM100Q9NV29 134 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 ZDHHC8Q9ULC8 765 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 DMRT1Q9Y5R6 373 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 EXPH5Q8NEV8 1989 aa12.51□□□□□ -0.41
SFSWAP-210ENST00000541286 TEX13DA0A0J9YY54 714 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 C21orf140B9A014 251 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 ADAM10O14672 748 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 TSPAN15O95858 294 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 FSTP19883 344 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 GLRA1P23415 457 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 CSNK2A1P68400 391 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 CSNK2A3Q8NEV1 391 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 OR10S1Q8NGN2 331 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 GTF3AQ92664 365 aaKnown RBP12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 FAM206AQ9NX38 181 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 IGHV3-15A0A0B4J1V0 119 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 UMAD1C9J7I0 102 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 NR2C1P13056 603 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 GALNSP34059 522 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF84P51523 738 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF529Q6P280 563 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 C17orf78Q8N4C9 275 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 OR5H2Q8NGV7 314 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 OCSTAMPQ9BR26 566 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF71Q9NQZ8 489 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 CHD6Q8TD26 2715 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 PRH1P02810 166 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 PLA2G5P39877 138 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 TGIF2LXQ8IUE1 241 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 TCEAL7Q9BRU2 100 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 EHFQ9NZC4 300 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 DNAJB11Q9UBS4 358 aa12.5□□□□□ -0.41
SFSWAP-210ENST00000541286 A0A1W2PQD3 144 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF726A6NNF4 738 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 LDLRAD4O15165 306 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 CELA3AP09093 270 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 FABP4P15090 132 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 PLAC9Q5JTB6 97 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 BATF2Q8N1L9 274 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 OR8B12Q8NGG6 310 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 PIGTQ969N2 578 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 S100A13Q99584 98 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 CRLF2Q9HC73 371 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 TREM2Q9NZC2 230 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 PRR14LQ5THK1 2151 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF814B7Z6K7 855 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 SLC33A1O00400 549 aaPredicted RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 EFNA2O43921 213 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 FCGR3AP08637 254 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 ZNF43P17038 809 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 GABRR1P24046 479 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 GUCA1AP43080 201 aaPredicted RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 MMP16P51512 607 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 IL34Q6ZMJ4 242 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 TERB2Q8NHR7 220 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 RNF122Q9H9V4 155 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 DOK5Q9P104 306 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 LSM5Q9Y4Y9 91 aaKnown RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 A0A087X0M5 115 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 A0A0A6YYD4 124 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 A0A1B0GX30 115 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 BTBD17A6NE02 478 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 RAD51DO75771 328 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 BLVRBP30043 206 aaPredicted RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 SPACA9Q96E40 222 aaPredicted RBP12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 PGAM5Q96HS1 289 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 RARRES2Q99969 163 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 LPAR5Q9H1C0 372 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
SFSWAP-210ENST00000541286 PHOX2AO14813 284 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 OR2C1O95371 312 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 CX3CR1P49238 355 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 SSTP61278 116 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 CLEC18BQ6UXF7 455 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 MFSD8Q8NHS3 518 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 LURAP1Q96LR2 239 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 MSRB2Q9Y3D2 182 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 LIPT2A6NK58 231 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 F8VVB4 439 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 F8VWA3 439 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 PTGDSP41222 190 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 MLF1P58340 268 aa12.48□□□□□ -0.41
SFSWAP-210ENST00000541286 C1QL2Q7Z5L3 287 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms