RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 F10P00742 488 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 CD63P08962 238 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 CXCL1P09341 107 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 AADACP22760 399 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 NDUFA6P56556 154 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 FAM3AP98173 230 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 PLPP5Q8NEB5 264 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 LYPD6BQ8NI32 183 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 NABP1Q96AH0 204 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 RHOVQ96L33 236 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 IL36RNQ9UBH0 155 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 TRIOBPQ9H2D6 2365 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 NSG1A0A0A6YYJ2 146 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 TNFSF11O14788 317 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 PPIHO43447 177 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 B4GALT1P15291 398 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 MSR1P21757 451 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 DUSP1P28562 367 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 NPBWR2P48146 333 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF84P51523 738 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 EIF5AP63241 154 aaKnown RBP8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 FGFBP3Q8TAT2 258 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 NELFAQ9H3P2 528 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 C8orf33Q9H7E9 229 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 LUZP4Q9P127 313 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 CACNA1DQ01668 2161 aa8.99□□□□□ -0.97
CDC42SE1-207ENST00000540998 DOCK11Q5JSL3 2073 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF724A8MTY0 619 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 H7C1Q1 480 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SCRG1O75711 98 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGLV3-19P01714 112 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 LCATP04180 440 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 GAPDHP04406 335 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 LBX1P52954 281 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 KIAA0141Q14154 515 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 C4orf17Q53FE4 359 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SPNS3Q6ZMD2 512 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 MSI2Q96DH6 328 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 NPIPB13A6NJU9 1138 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 AQP7P3A6NL99 342 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 NPIPB4C9JG80 1138 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 E5RGE8 158 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 CCL3P10147 92 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 ATP6V0CP27449 155 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 P2RY1P47900 373 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 NXPH1P58417 271 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 GRB2P62993 217 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 EWSR1Q01844 656 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 HIST3H3Q16695 136 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 PYY3Q5JQD4 70 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 C9orf135Q5VTT2 229 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR2G3Q8NGZ4 309 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 TM2D1Q9BX74 207 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 GLRX2Q9NS18 164 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 CRIM1Q9NZV1 1036 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 NSG2Q9Y328 171 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 HDGFL3Q9Y3E1 203 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 HS3ST3B1Q9Y662 390 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SPENQ96T58 3664 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 TMEM50AO95807 157 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 S100A12P80511 92 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SOHLH1Q5JUK2 328 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SPIN3Q5JUX0 258 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 GUSBP11Q6P575 273 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 GGACTQ9BVM4 153 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC35B3Q9H1N7 401 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 UCK1Q9HA47 277 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC7A11Q9UPY5 501 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 V9GYS6 101 aa8.98□□□□□ -0.97
CDC42SE1-207ENST00000540998 PRR14LQ5THK1 2151 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF587BE7ETH6 402 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 AP4M1O00189 453 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR7C1O76099 320 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGHV2-70P01814 119 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 CCL2P13500 99 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 RGS19P49795 217 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 ERVFRD-1P60508 538 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 UNQ6494/PRO21346Q6UXR6 183 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 SLC16A14Q7RTX9 510 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 CALHM1Q8IU99 346 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 SUMF2Q8NBJ7 301 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 SMRP1Q8NCR6 262 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 GJC3Q8NFK1 279 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 Q8WTZ3 238 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 RAB39BQ96DA2 213 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 SRXN1Q9BYN0 137 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 DEFB126Q9BYW3 111 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 ULBP2Q9BZM5 246 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 METTL1Q9UBP6 276 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 ST3GAL6Q9Y274 331 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 BORCS7-ASMTA0A0B4J1R7 106 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 NPIPA2E9PIF3 369 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 NPIPA3F8WFD2 350 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 GPR137BO60478 399 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 CHATP28329 748 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 RND3P61587 244 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms