RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 SERPINB10P48595 397 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TAS2R39P59534 338 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TRAM1Q15629 374 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 SLC36A2Q495M3 483 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 VPS26BQ4G0F5 336 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 SPIN3Q5JUX0 258 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 PPM1LQ5SGD2 360 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 SYPL2Q5VXT5 272 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 OR52W1Q6IF63 320 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 ZNF836Q6ZNA1 936 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 ZNF571Q7Z3V5 609 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 CPNE9Q8IYJ1 553 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 ZNF683Q8IZ20 524 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 CMTM8Q8IZV2 173 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 PGAM4Q8N0Y7 254 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 DHRSXQ8N5I4 330 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 C2orf73Q8N5S3 287 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 CLDN22Q8N7P3 220 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TMEM161BQ8NDZ6 487 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 OR9G4Q8NGQ1 327 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 OR51A7Q8NH64 312 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 ZNF420Q8TAQ5 688 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 ZNF721Q8TF20 911 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TMEM239Q8WW34 195 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 APH1BQ8WW43 257 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TMEM234Q8WY98 164 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 HBEGFQ99075 208 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 STACQ99469 402 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 FMO2Q99518 471 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TSNAXQ99598 290 aaKnown RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 TIMM29Q9BSF4 260 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 RSPO3Q9BXY4 272 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 ULBP2Q9BZM5 246 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 RPF2Q9H7B2 306 aaKnown RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 NMNAT1Q9HAN9 279 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 C6orf50Q9HD87 102 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 C1orf109Q9NX04 203 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 MAT2BQ9NZL9 334 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 SLC7A11Q9UPY5 501 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 OR10H1Q9Y4A9 318 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 TSPOAP1O95153 1857 aa3.38□□□□□ -1.87
YBX3-210ENST00000540975 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.38□□□□□ -1.87
YBX3-210ENST00000540975 ZNF609O15014 1411 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 A0A0D9SFI3 127 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 PRSS37A4D1T9 235 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 BTNL10A8MVZ5 291 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 LEUTXA8MZ59 168 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 HACD1B0YJ81 288 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 J3QRK9 145 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 M0R036 132 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 CXCR6O00574 342 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 BHLHE40O14503 412 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 AIREO43918 545 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TIMM8AO60220 97 aaPredicted RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 BANF1O75531 89 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SCO1O75880 301 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 CCNE2O96020 404 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 LGALS2P05162 132 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 ACSM4P0C7M7 580 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 PET100P0DJ07 73 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TDGF1P13385 188 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 ZNF25P17030 456 aaPredicted RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 CSNK2A2P19784 350 aaPredicted RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 MMP11P24347 488 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 MAP2K4P45985 399 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 NPBWR2P48146 333 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TFPI2P48307 235 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RFX3P48380 749 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 NMUP48645 174 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TDGF1P3P51864 188 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SLC18A1P54219 525 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SNAP25P60880 206 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 CDC42P60953 191 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RANP62826 216 aaKnown RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 LCN2P80188 198 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SLC7A9P82251 487 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RPL19P84098 196 aaKnown RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 FAM3AP98173 230 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 GTF2BQ00403 316 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SRSF6Q13247 344 aaKnown RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 CDK10Q15131 360 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 PSG5Q15238 335 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TNXAQ16473 311 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 MRPL23Q16540 153 aaKnown RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 RFX4Q33E94 735 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 GGTA1PQ4G0N0 100 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RNASE10Q5GAN6 216 aaKnown RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 GCSAMLQ5JQS6 135 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 DNLZQ5SXM8 178 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 SYT6Q5T7P8 510 aaPredicted RBP3.37□□□□□ -1.87
YBX3-210ENST00000540975 C9orf135Q5VTT2 229 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 MED27Q6P2C8 311 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 KCNIP4Q6PIL6 250 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 LINC00299Q6ZSB3 139 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TMED4Q7Z7H5 227 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 RAB43Q86YS6 212 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 TRAPPC5Q8IUR0 188 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 WDFY1Q8IWB7 410 aa3.37□□□□□ -1.87
YBX3-210ENST00000540975 ARRDC1Q8N5I2 433 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms