RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 LGALS8O00214 317 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 ZNF737O75373 536 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 CYB5R3P00387 301 aaPredicted RBP8.82□□□□□ -1
VPS33A-204ENST00000540669 PLATP00750 562 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 APOA1P02647 267 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 OCMP0CE72 109 aaPredicted RBP8.82□□□□□ -1
VPS33A-204ENST00000540669 TMEM225BP0DP42 221 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 LMO1P25800 156 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 ETV6P41212 452 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 BTG1P62324 171 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 MPV17LQ2QL34 196 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 SMIM21Q3B7S5 101 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 SLC22A6Q4U2R8 563 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 IDNKQ5T6J7 187 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 FAM58AQ8N1B3 248 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 GAPTQ8N292 157 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 OR11L1Q8NGX0 322 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 OR10K1Q8NGX5 313 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 AP3S1Q92572 193 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 SEH1LQ96EE3 360 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 PERPQ96FX8 193 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 SDSLQ96GA7 329 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 SOSTQ9BQB4 213 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 TMEM59Q9BXS4 323 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 METTL9Q9H1A3 318 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 MMP27Q9H306 513 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 RHBDL2Q9NX52 303 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 ZNF581Q9P0T4 197 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 KAAG1Q9UBP8 84 aa8.82□□□□□ -1
VPS33A-204ENST00000540669 CR1P17927 2039 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 A0A0A6YYH2 397 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 OOEPA6NGQ2 149 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 A6NJ64 397 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 LRRC30A6NM36 301 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 LYNX1G3V0Z9 82 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 NDUFS8O00217 210 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 TPPPO94811 219 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 CYB5AP00167 134 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 CSF3P09919 207 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 LYNX1P0DP58 116 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 PSG2P11465 335 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 GTF2F2P13984 249 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 CHATP28329 748 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 CD80P33681 288 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 SOX6P35712 828 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 ATP5J2P56134 94 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 TMEM33P57088 247 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 HFEQ30201 348 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 PIGYQ3MUY2 71 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 TMEM155Q4W5P6 130 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 UBE2NLQ5JXB2 153 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 FAM201AQ5SY85 155 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 PRSS57Q6UWY2 283 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 ZNF788Q6ZQV5 615 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 CCDC190Q86UF4 302 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 LRRC28Q86X40 367 aaPredicted RBP8.81□□□□□ -1
VPS33A-204ENST00000540669 LAX1Q8IWV1 398 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 C1orf87Q8N0U7 546 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 OSR2Q8N2R0 312 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 ZNF525Q8N782 197 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 C10orf105Q8TEF2 133 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 EMG1Q92979 244 aaKnown RBP8.81□□□□□ -1
VPS33A-204ENST00000540669 CYYR1Q96J86 154 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 NICN1Q9BSH3 213 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 TMEM165Q9HC07 324 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 NLKQ9UBE8 527 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 WIPI2Q9Y4P8 454 aa8.81□□□□□ -1
VPS33A-204ENST00000540669 MAST4O15021 2626 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 TRAV24A0A0B4J272 114 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 OR2AT4A6NND4 320 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 CLDN25C9JDP6 229 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 MFNGO00587 321 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 CTDSP2O14595 271 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 GEMIN2O14893 280 aaKnown RBP8.8□□□□□ -1
VPS33A-204ENST00000540669 TPD52L2O43399 206 aaKnown RBP8.8□□□□□ -1
VPS33A-204ENST00000540669 CLPXO76031 633 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 NXPH2O95156 264 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 MPIG6BO95866 241 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 CSN2P05814 226 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 EIF4EP06730 217 aaKnown RBP8.8□□□□□ -1
VPS33A-204ENST00000540669 INHBBP09529 407 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 SERPINA2P20848 420 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 GLRA1P23415 457 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 CPT2P23786 658 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 TMEM50BP56557 158 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 RSU1Q15404 277 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 MOGAT2Q3SYC2 334 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 Q5PR19 223 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 SPNS3Q6ZMD2 512 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 RTN4RL2Q86UN3 420 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 CMTM4Q8IZR5 234 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 MFSD4AQ8N468 514 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 CD177Q8N6Q3 437 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 OR6Q1Q8NGQ2 317 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 MCFD2Q8NI22 146 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 RAB40AQ8WXH6 277 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 ST8SIA4Q92187 359 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 DACT3Q96B18 629 aaPredicted RBP8.8□□□□□ -1
VPS33A-204ENST00000540669 GAFA1Q96PS6 74 aa8.8□□□□□ -1
VPS33A-204ENST00000540669 GAL3ST1Q99999 423 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms