RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SPIN3Q5JUX0 258 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 OR52W1Q6IF63 320 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 CRIP3Q6Q6R5 217 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 DNAAF1Q8NEP3 725 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 AJUBAQ96IF1 538 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 CIB1Q99828 191 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 MTCH1Q9NZJ7 389 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-211ENST00000539843 PAX6P26367 422 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 EPHA2P29317 976 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 VDAC2P45880 294 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-211ENST00000539843 DLX6P56179 175 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 MTCP1P56278 107 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 NSUN5P1Q3KNT7 163 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 SSX6Q7RTT6 188 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 KCTD20Q7Z5Y7 419 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 SPSB1Q96BD6 273 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 CLEC7AQ9BXN2 247 aa12.37□□□□□ -0.43
UBE3B-211ENST00000539843 SEBOXQ9HB31 216 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-211ENST00000539843 TRGV10A0A0A0MS01 117 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 TRBV2A0A0J9YWF9 115 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 MGST3O14880 152 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 APOL3O95236 402 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
UBE3B-211ENST00000539843 PRKACAP17612 351 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 HTR1DP28221 377 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 BRS3P32247 399 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 AMIGO2Q86SJ2 522 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 NDUFA11Q86Y39 141 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 TRUB1Q8WWH5 349 aaKnown RBP12.36□□□□□ -0.43
UBE3B-211ENST00000539843 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-211ENST00000539843 GABARAPL3Q9BY60 117 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 TMEM133Q9H2Q1 129 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 EXOSC4Q9NPD3 245 aaKnown RBP12.36□□□□□ -0.43
UBE3B-211ENST00000539843 UBE2J1Q9Y385 318 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-211ENST00000539843 HILPDAQ9Y5L2 63 aa12.36□□□□□ -0.43
UBE3B-211ENST00000539843 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 A6NDX4 124 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 G3V4G9 280 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 SH2D1BO14796 132 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 HTR1AP08908 422 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 ATF1P18846 271 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 ERP29P30040 261 aaKnown RBP12.35□□□□□ -0.43
UBE3B-211ENST00000539843 RAB13P51153 203 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF91Q05481 1191 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 BNIP1Q12981 228 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 TP53I3Q53FA7 332 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 UTS2BQ765I0 119 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 C16orf82Q7Z2V1 217 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 RTN4RL2Q86UN3 420 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 TMEM219Q86XT9 240 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 Q8N2B8 174 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF596Q8TC21 504 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 PIFOQ8TCI5 191 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 STMN2Q93045 179 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 R3HDM4Q96D70 268 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 OPALINQ96PE5 141 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 CHST6Q9GZX3 395 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 OAZ3Q9UMX2 235 aa12.35□□□□□ -0.43
UBE3B-211ENST00000539843 VWFP04275 2813 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 IGKV1-27A0A075B6S5 117 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 DAPL1A0PJW8 107 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 TMEM82A0PJX8 343 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 MEX3AA1L020 520 aaKnown RBP12.34□□□□□ -0.43
UBE3B-211ENST00000539843 BCL3P20749 454 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 CEACAM3P40198 252 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 SNU13P55769 128 aaKnown RBP12.34□□□□□ -0.43
UBE3B-211ENST00000539843 P2RX3P56373 397 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 KPNB1Q14974 876 aaKnown RBP12.34□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF146Q15072 292 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 BEAN1Q3B7T3 259 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 MEDAGQ5VYS4 303 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 PRSS35Q8N3Z0 413 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 EME1Q96AY2 570 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 CPNE2Q96FN4 548 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-211ENST00000539843 RHOFQ9HBH0 211 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 RBFOX1Q9NWB1 397 aaKnown RBP12.34□□□□□ -0.43
UBE3B-211ENST00000539843 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 GSTK1Q9Y2Q3 226 aa12.34□□□□□ -0.43
UBE3B-211ENST00000539843 F8VVB4 439 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 F8VWA3 439 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 SIRPB1O00241 398 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 TOR1AO14656 332 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 IGHA1P01876 353 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 ZNF44P15621 663 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-211ENST00000539843 SAMD5Q5TGI4 173 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 DYNAPQ8N1N2 210 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 TPRX1Q8N7U7 411 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 OR13C3Q8NGS6 347 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 OR2G2Q8NGZ5 317 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 RNFT2Q96EX2 444 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 OR5M11Q96RB7 305 aa12.33□□□□□ -0.44
UBE3B-211ENST00000539843 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms