RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 RSU1Q15404 277 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 IAH1Q2TAA2 248 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-207ENST00000538862 KRTAP27-1Q3LI81 207 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 LHFPL2Q6ZUX7 228 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 OR1F12Q8NHA8 337 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 FNDC9Q8TBE3 224 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 CPT1CQ8TCG5 803 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 ACKR4Q9NPB9 350 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 IL17BQ9UHF5 180 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF391Q9UJN7 358 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 PADI1Q9ULC6 663 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 BOD1L1Q8NFC6 3051 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 F8W036 122 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 G3V3Y1 287 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 GPR31O00270 319 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 CST4P01036 141 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 GAPDHP04406 335 aaKnown RBP12.62□□□□□ -0.39
CDCA3-207ENST00000538862 OR5H8P0DN80 308 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF708P17019 499 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 AKR1C2P52895 323 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 B3GALT5-AS1P59052 145 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-207ENST00000538862 AKR1C1Q04828 323 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 C6orf15Q6UXA7 325 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-207ENST00000538862 MICU1Q9BPX6 476 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 TAF9BQ9HBM6 251 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 OR2S2Q9NQN1 319 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 TMEM38BQ9NVV0 291 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 NECAP2Q9NVZ3 263 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 NDRG3Q9UGV2 375 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 KCNIP3Q9Y2W7 256 aa12.62□□□□□ -0.39
CDCA3-207ENST00000538862 PRSS44E7EML9 344 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 ST8SIA5O15466 376 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
CDCA3-207ENST00000538862 RBP2P50120 134 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 SMCO1Q147U7 214 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 TMEM42Q69YG0 159 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 LDLRAD3Q86YD5 345 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
CDCA3-207ENST00000538862 HDHD3Q9BSH5 251 aaPredicted RBP12.61□□□□□ -0.39
CDCA3-207ENST00000538862 FAAP24Q9BTP7 215 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 CRLF2Q9HC73 371 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
CDCA3-207ENST00000538862 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 OR6C6A6NF89 314 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
CDCA3-207ENST00000538862 MSTNO14793 375 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 DEDDO75618 318 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 JTBO76095 146 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 SNAPINO95295 136 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 IGHEP01854 428 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 FOLR3P41439 243 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 SULT1A2P50226 295 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 CARD18P57730 90 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TSC22D1Q15714 1073 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TAF9Q16594 264 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 GGNBP1Q5YKI7 109 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 RPL7L1Q6DKI1 246 aaKnown RBP12.6□□□□□ -0.39
CDCA3-207ENST00000538862 DHRS7BQ6IAN0 325 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF774Q6NX45 483 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 PCSK4Q6UW60 755 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 SPAG16Q8N0X2 631 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 OR2AE1Q8NHA4 323 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 BORCS8Q96FH0 119 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 RGCCQ9H4X1 137 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TREM1Q9NP99 234 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 AK3Q9UIJ7 227 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 IGKV1-27A0A075B6S5 117 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF716A6NP11 495 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 K7EPK0 472 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ANGPTL7O43827 346 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 LCATP04180 440 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 CHATP28329 748 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 CAV2P51636 162 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 CHAF1BQ13112 559 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 FAM209BQ5JX69 171 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ATP1A1-AS1Q5TC04 95 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TMEM268Q5VZI3 342 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 H3F3CQ6NXT2 135 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 FAM71E2Q8N5Q1 922 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF775Q96BV0 537 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-207ENST00000538862 GALNT14Q96FL9 552 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TLNRD1Q9H1K6 362 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 PLEKHA2Q9HB19 425 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 RHOFQ9HBH0 211 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 TIMM10BQ9Y5J6 103 aa12.6□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF98A6NK75 572 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 H7C2Y5 167 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 NKX2-8O15522 239 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 SPRY1O43609 319 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-207ENST00000538862 NRASP01111 189 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 PRB1P04280 392 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 P04436 131 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms